Gene Hoch_2019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2019 
Symbol 
ID8544401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2788068 
End bp2789726 
Gene Length1659 bp 
Protein Length552 aa 
Translation table11 
GC content70% 
IMG OID646386722 
Product2,3-dihydroxybenzoate-AMP ligase 
Protein accessionYP_003266457 
Protein GI262195248 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1021] Peptide arylation enzymes 
TIGRFAM ID[TIGR02275] 2,3-dihydroxybenzoate-AMP ligase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.6073 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCCG AGCGTCCGAA TTCGCCAGCT CTCAAGGGCT GGACCCCGTG GCCGGCGGCG 
TATGCCGCCG CCTATCGCCG CGCCGGCTAC TGGCGCGGCG ATACCTTTGA CAAGATGCTG
CGCGAGCGCG CCCAGGAGCA CGGCGAGCGC GAGGCCGTGG TCGATGGCCT GCGACGCCTG
AGCTACCGTG CGCTCGATGA GCGGGCTTCG CGTCTGGCGG TGGGATTTCG GACGCTCGGC
ATCGAGCCTG GCGCGCGCGT GGTGGTGCAG CTCCCCAACC GCGTCGAGTT CTTCGAGGTG
TGTTTCGCGC TGTTCCGCCT GGGCGCGCTG CCGGTGATGG CGCTGCCCGC GCACCGCCGG
GTCGAGATCG CGTATTTCTG CCAGTTCACC GAGGCCAGCG CCTACGTTAT CGCCGACCGC
GTGGCCGGGT TTGACTATCG CGCCCTGGCC GACGAGGTGA ACGCCGAGAC CCCAAGCCTG
CGACACGTCA TCGTCGTGGG CGAGGCCGGC GAGCACACGG CCCTCGAGTC GCTGGTGGCA
CAGGGCCCGC TGCCGGCGCC GGACTGGCCC GCGCCCGCGC CCGCAGACGT GGCGTTTTTT
CAGCTCTCGG GCGGCAGCAC AGGCGTGCCC AAGCTCATCC CGCGCACCCA CGACGACTAT
CTCTACAGCG TGCGCGCCAG CGCCGAGATC TGCCGACTCG ATCGCGACAG CGTGTACCTG
GCCGCGCTGC CGGCGGCGCA CAATTTCACC CTCAGCTCGC CCGGCAGCCT GGGCGCGCTG
TATGCGGGCG GGCGCGTGGT GCTTTGCGAG CGACCCAGCC CCGACGACGC CTTTCCGCTC
ATCGAGCGCG AGCGCGTGAG CATCACCGCG CTGGTGCCAC CGCTGGTGTC GGTGTGGCTC
GACGCGGCCC GCGCCGGACG CAACGATCTC TCCAGCCTGC AGGTGTTGCA GGTGGGCGGC
GCCAAGCTCG GCGCCGAGCT GGCGCGGCGC GTGCGTCCGG GCCTGGGTTG CAGCTTGCAG
CAGGTCTTCG GCATGGCCGA GGGCCTGGTC AACTACACGC GCCTCGACGA CCCCGAGGAG
CTCATCGCCG AGACCCAGGG GCGTCCGATC TCGCCGGATG ACGAGATCCG CGTGGTCGAC
GACGACGATC GCGAGCTCGA GATCGGACAA GTGGGCCATT TGCTCACGCG CGGACCGTAC
ACCATTCGCG GCTACTACAA GGCCGATGCG CACAACGCGC GCGCGTTCAC CAGCGACGGC
TTCTACCGCA CCGGCGACCT GGTGCGGCTC ACGCCCGAGG GCTATCTGGT GGTCGAGGGC
CGGGCCAAGG ACCAGATCAA TCGCGGCGGC GAAAAGATCG CGGCCGCCGA GATCGAGAAC
CATCTGCTCG CCCACCCCGA GGTGCTCGAC GCCGCCATCG TCGCCATGCC CGACGCGTTT
CTCGGCGAGC GTTCGTGTGC CTTCGTCATC GCCCGCGACC AGCCGCCGCG CGCACGCGCG
TTGCTCGCCT TTCTACGCCA GCGCGGCCTG GCCGCCTTCA AGATTCCCGA CCGCGTCGAA
TTCGTCGACG CCTTTCCCAA GACCAGCGTC GGCAAGGTCG ACAAACGCGC GTTGCGCGCT
CGCATCACCG AGCTGCTCGC GGCCCGCGCG TCGGCCTGA
 
Protein sequence
MQPERPNSPA LKGWTPWPAA YAAAYRRAGY WRGDTFDKML RERAQEHGER EAVVDGLRRL 
SYRALDERAS RLAVGFRTLG IEPGARVVVQ LPNRVEFFEV CFALFRLGAL PVMALPAHRR
VEIAYFCQFT EASAYVIADR VAGFDYRALA DEVNAETPSL RHVIVVGEAG EHTALESLVA
QGPLPAPDWP APAPADVAFF QLSGGSTGVP KLIPRTHDDY LYSVRASAEI CRLDRDSVYL
AALPAAHNFT LSSPGSLGAL YAGGRVVLCE RPSPDDAFPL IERERVSITA LVPPLVSVWL
DAARAGRNDL SSLQVLQVGG AKLGAELARR VRPGLGCSLQ QVFGMAEGLV NYTRLDDPEE
LIAETQGRPI SPDDEIRVVD DDDRELEIGQ VGHLLTRGPY TIRGYYKADA HNARAFTSDG
FYRTGDLVRL TPEGYLVVEG RAKDQINRGG EKIAAAEIEN HLLAHPEVLD AAIVAMPDAF
LGERSCAFVI ARDQPPRARA LLAFLRQRGL AAFKIPDRVE FVDAFPKTSV GKVDKRALRA
RITELLAARA SA