| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2017 |
|---|
| Symbol | |
|---|
| ID | 8544399 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 2781854 |
|---|
| End bp | 2786113 |
|---|
| Gene Length | 4260 bp |
|---|
| Protein Length | 1419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 646386720 |
|---|
| Product | amino acid adenylation domain protein |
|---|
| Protein accession | YP_003266455 |
|---|
| Protein GI | 262195246 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins |
|---|
| TIGRFAM ID | [TIGR01733] amino acid adenylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0369158 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.503018 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACTCAT CTCTGCAAGC GCACGCGTCT GCCGCGAGCG CACAGCCTCA TGGCGCGGAC
GCGCCGCGCG TCGAGTTGCC GCTGAGCGCG GCACAGCACG GCATCTGGCT GGGGCAGCAG
CTCGACCCCG ACAGTCCGGC GTACAACACG GCCGAGTGCA TCGAGATTCA CGGCCCCATC
GATCCCGTGC ATTTCGAGGC CGCGCTGCGC CAGGTGATGC ACGAGGCGCA GACCCTGCGC
ATGGCCGTGG TGGCGGCCGA CGGCTCGCGC CAGCGAGAGC GGGCGATGAG CGACTGGCGC
TTCGTGTACC GCGCCTACGA CGCTGGCGCG GACTGGCTGG CGACGCGTGC GGGCGACGCG
CTCGCGAGCG CTGGGGCCGC GACCGTCGAG ACCGCTGCTG CCGATGCGCC CGACGCCGCG
GCCCGCGCCT GGATGGACGC CGACATGCGC ACGCCGGTCG ATCTGGCGCG CGGTCCGCTG
TTTGCGCACG CGCTGTTCCA GTGCGCGGCG GATCGCTACC TGTGGTACTT CCGCGCCCAT
CACATCGCGC TCGACGGCCT CGGCTTCTCG CTGGTCGCGC GCCGCGTAGC CGCGGTGTAC
AGCGCCCGCA TGCAGGGCAC GGCAGCGCGC TCGCCCGCGG CCTTTGGCCC GCTCGAGCAG
GTGGTGCGCG AGGATCTAGC CTATCTCGGC TCGGACGATT ACCAGCGCGA TCGCGGGTTC
TGGATCGACC AGATGTCCGA TATCGACACG CCGGCGACCC TGGCGCGGCG GGCGGCGCCG
GTGTCGCGCA CGGTGGTGCG CGATGCTGCG CGGCTCGACC CGGCGTTGCA CGCGTCCCTG
CAGGCGGCCG CGCGCGGCGC GCGCACGACC TGGCCGGCGC TGATGCTGCT GGCCACCAGC
GTGTATCTCG GCCGCAGCAC GGGCGCCTCC GAGCTGGTGC TGGGGCTGCC GGTGATGGCT
CGTCTGGGCT CGGCCGCGAT GCGCGTGCCG TGCATGGCCA TGAACATCGT GCCGCTGCGA
CTGCCGGTGC CGGCCGAGGG CGAGTTCGCC GCGGGCCTGG CCCAGGTGAC CCAGCTCCTC
GCCCGCGTGC GCCCGCACCA GCGTTACCGC TACGAGCATC TGCGCCGCGA GCTCGGTCGT
GTCGGCGGAG ACCGGCGCTT GTTCGGACCG GTGGTCAATC TGATGCCTTT CGATCACCCG
CTGAGCTTCG CCGGTCATCC GGCGACCACG CACAACCTCT CGGCGGGTCC GGTGGAGGAT
CTGTCGATCG GCGTACGCGC ATGCGCGGCC GGAGGTCCTG GCGCAGATGG CGCCGAGCGC
GCGCCCACGC TGAAGCTCGA ACTCGACGGC AACCCGGCCT GCTACCGCGC CGACGAGCTG
GCCGCGCACC GGCGCGGCCT GTGCGACACG CTGGCCGAGA TCGCAGACAA CCTGAACGAT
CTCGACGGCC CGACGGCGCC GCGAGCAAGC GCGCGCCCTG TTCGCGCGGC GCACGCGGGC
GCGTTGATCG CGGGCGAGTG CGCGTTCGGC CCGGCGCGCT CGGTGTGTGC GCTGCTGCTC
GAGCGCGCCG CCCGCCACGG CGAAGACACG GCCGTGGTGT GCGGCGACAC GCAGCTCAGC
TACGCGCAGC TCGTCGCCGC GGCCAGCGCG CTGGCGCTCG AGCTGCGGCG CCGCGGCGCG
GGCCCCGAGA CCCTGGTCGC GGTGCTGCTG CCGCGCAGCG CTGAGGCCAT CGTCGCCATC
GTCGCCGTGC TGCTCGCGGG CGGCGCCTAT CTGGCGCTCG ATCCCGACGC GCCGCGCTCG
CGCAATCAGG CCATCGACGA ACACGCCGCG CCCGCGCTGG TGGTGACCGA TGAGACCGCC
GGCAACGCGC TCGGCGACGC CATCGGCACG CGCGCCGTCC GCGTGGACCA AATCCTGGGC
CGCCGCGATC GCGCGCTCGG CGTGACGCCC GCGCTGCCCA CCGAGTTCGC ACCCGATTCG
CTGGCCTATG TCATCTACAC CTCGGGCTCC ACCGGCGCCC CCAAAGGCGT GCAGGTCGAG
CACGACGCGC TCGCGCATTT CGTGGCCGGC GCCATGCAGC GCTACCGCGT GCGCCACCGC
GACCGGGTGT TGCAGTTCGC GCCCCTGCAC TTCGACGCCA GCATCGAGGA GATCTTCGTG
ACGCTGTGCG CGGGCGCTAC GCTGGTGCTG CGCGCCAGCG ATATGCTCGA CTCGGTGCCG
CGCTTCCTCG AGGCCTGCGC GGCGCAGGCG ATCACGGTGC TCGACTTGCC CACGGCCTAC
TGGCACGAGC TGGCGTACAG CATCTCGACC GGGGCGGCGA CGCTGCCGCC CTGCGTGCAC
ACGGTGATCA TCGGCGGCGA GGCCGCGCTG CCCGAACGCG TGGCCCGCTG GCGCAGTTCG
GTGGCCAGCC TGGTGGCGCT GCTCAACACC TACGGTCCCA GCGAGGCGAC CATCGTGGCC
ACGGTGGCGA TGCTCGCAGG CCCCGATCCG ATCGCGGTGG ACGGCGACGA GGTGCCCATC
GGTCTGCCGC TCGGCAACAC CGGCGCGGCC GTGCTCGACC GACGGGCGCA GCCGGTGCCG
CGCGGCGCGA TCGGCGAGCT GTACCTCACC GGGCCGAGTC TGGCGCGCGG CTATCTGGGA
CGCGACGACC TGAGCGAGAG CCGCTTCGTC ACCCTGCAGC ACCTGCCCGG GACGCCGCGC
GCCTACCGCA CCGGCGACCT GGTGCGCCAG CGCGCCGACG GCCAGCTGGT GTTTATCGGA
CGCGTGGACG ATGAGTGCAA GATCAGCGGC CACCGGGTGT CGCCAGCCGA GATCGAGACG
GTACTGGCGG CCGCGCCCGG CGTTCGCGAG GCGGCCGTGA TCGCGCGCGA CGAAGCCGGT
AGCAAGTACC TGGCCGCGCA CGTGGCCGCG GATGCGCCAG CGCCGACGCC GGCCGAGCTG
CGCCAACATC TGCGCGCCGC CCTGCCCCCG GCGCTGGTGC CAAGCGCCAT CCATTTGCAC
GAGCGGCTGC CGCGCAATCC CGCCGGCAAG ATCGACCGCG CGGCGCTCGC CCGCGCCCAG
GTCCAGGCAG CGGTGAGCGA TGCGGCTCCA GCGGCGCCGA TGTCACCCGG CGAGCGGCAG
GTGCTCGAGG TCTGGCACCA GGTGCTGGGC CTGAACGCGC TGCGACCCGA GGATGACTTC
TTTGCCCTCG GCGGCCAGTC GCTGCAGTCG ATTCAGGTCG CCAATCGCCT CGGCGTCGCC
CTGGGCCGCG ACGTGCCGGT GGCGCTGCTG TTTCGCTACC CCACGGCCGC GGGTCTGGCC
TGGGCGCTCG AGCACGAGCT CGCGCCCGCC GCGAGCGCGG GTCCGCGCGA TGGTCGCGCG
GCCAACCCCG GGCTGTCGCC GCTGCTGTCG ATTGCCGGAC AGTCGGACGA ATTCTCAGGG
CACGGCCAGG CGGACGAGAC CACGACGCGC ACGCCGCTGT TCTGCGTGCA CCCGGCGGCC
GGTCTGAGCT GGAGCTACCT GGCGCTCACC CGCCATCTGG ACAGCAGACG CGCGGTCTAC
GGGATACAGT CGCCCGCGCT GAGCGGCGAC GCGGCGACGC CGGAGGGATA CGCCTCGCTC
GCCGACCTGG CGTCCGATTA CGTGGCCCGC ATCCGGGCGG TGCAACCGAG CGGCCCCTAC
GCGCTGCTCG GCTGGTCCAT GGGCGGCGTG ATCGCGCACG CCATGGCCGC TCGGCTCCAA
GCGCAGGGCC ACGAGGTGGC GCTGCTGGCC CTGCTCGACG CCTACCCGCG CGAATCCTGG
CCCGAGCCGC GCGACAGCGC CGAGCGCGAG GCGATGCGCG CGCTGCTGCA CATCGCCGGG
CCGCGCGTGA CCGGCGACGA CGACGCGCCC GATGACACGA TCGGCGACGC GTCCGATGAC
GCGCCCGGCA CGCGCGAGCA GCTACGCGCC CGTCTCGCTG GCGCCGGCAG CGCCTTGCGC
GGACTGGGCG ACGACGCGCT CGACGCGCTC GTCGCGGTCG CCACCCGCAA CGTCGAGCTG
CTGCGCACGG CCCAGCATCG CCCCTTCCGC GGCGACGCGG TGCTCTTCAC CGCCCGCCAG
ACGCGCACCC AGGAAGGCTT CTCGGGCGCC GCCTGGAAGC CGCACATCGA CGGCTGCATC
GAGTCCATCG AGTTCGAGTG CAGCCACGCA ACGATTCTGC AGGATGACCG CGCCGAGTTT
ATCGGCCAAG CGGTCGAACG ACGACTCAAC GAACGCGATC ACAGGAGAGA CGCGAGATGA
|
|---|
| Protein sequence | MHSSLQAHAS AASAQPHGAD APRVELPLSA AQHGIWLGQQ LDPDSPAYNT AECIEIHGPI
DPVHFEAALR QVMHEAQTLR MAVVAADGSR QRERAMSDWR FVYRAYDAGA DWLATRAGDA
LASAGAATVE TAAADAPDAA ARAWMDADMR TPVDLARGPL FAHALFQCAA DRYLWYFRAH
HIALDGLGFS LVARRVAAVY SARMQGTAAR SPAAFGPLEQ VVREDLAYLG SDDYQRDRGF
WIDQMSDIDT PATLARRAAP VSRTVVRDAA RLDPALHASL QAAARGARTT WPALMLLATS
VYLGRSTGAS ELVLGLPVMA RLGSAAMRVP CMAMNIVPLR LPVPAEGEFA AGLAQVTQLL
ARVRPHQRYR YEHLRRELGR VGGDRRLFGP VVNLMPFDHP LSFAGHPATT HNLSAGPVED
LSIGVRACAA GGPGADGAER APTLKLELDG NPACYRADEL AAHRRGLCDT LAEIADNLND
LDGPTAPRAS ARPVRAAHAG ALIAGECAFG PARSVCALLL ERAARHGEDT AVVCGDTQLS
YAQLVAAASA LALELRRRGA GPETLVAVLL PRSAEAIVAI VAVLLAGGAY LALDPDAPRS
RNQAIDEHAA PALVVTDETA GNALGDAIGT RAVRVDQILG RRDRALGVTP ALPTEFAPDS
LAYVIYTSGS TGAPKGVQVE HDALAHFVAG AMQRYRVRHR DRVLQFAPLH FDASIEEIFV
TLCAGATLVL RASDMLDSVP RFLEACAAQA ITVLDLPTAY WHELAYSIST GAATLPPCVH
TVIIGGEAAL PERVARWRSS VASLVALLNT YGPSEATIVA TVAMLAGPDP IAVDGDEVPI
GLPLGNTGAA VLDRRAQPVP RGAIGELYLT GPSLARGYLG RDDLSESRFV TLQHLPGTPR
AYRTGDLVRQ RADGQLVFIG RVDDECKISG HRVSPAEIET VLAAAPGVRE AAVIARDEAG
SKYLAAHVAA DAPAPTPAEL RQHLRAALPP ALVPSAIHLH ERLPRNPAGK IDRAALARAQ
VQAAVSDAAP AAPMSPGERQ VLEVWHQVLG LNALRPEDDF FALGGQSLQS IQVANRLGVA
LGRDVPVALL FRYPTAAGLA WALEHELAPA ASAGPRDGRA ANPGLSPLLS IAGQSDEFSG
HGQADETTTR TPLFCVHPAA GLSWSYLALT RHLDSRRAVY GIQSPALSGD AATPEGYASL
ADLASDYVAR IRAVQPSGPY ALLGWSMGGV IAHAMAARLQ AQGHEVALLA LLDAYPRESW
PEPRDSAERE AMRALLHIAG PRVTGDDDAP DDTIGDASDD APGTREQLRA RLAGAGSALR
GLGDDALDAL VAVATRNVEL LRTAQHRPFR GDAVLFTARQ TRTQEGFSGA AWKPHIDGCI
ESIEFECSHA TILQDDRAEF IGQAVERRLN ERDHRRDAR
|
|---|
| |