| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2002 |
|---|
| Symbol | |
|---|
| ID | 8544384 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 2762427 |
|---|
| End bp | 2763299 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 646386705 |
|---|
| Product | molybdopterin dehydrogenase FAD-binding protein |
|---|
| Protein accession | YP_003266440 |
|---|
| Protein GI | 262195231 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.328506 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATCCCC CCGCGTTCGA ATACGCCGCC CCGGACACCC TCGCTCAGGC GCTGGCCCTG
CTCGCCGAAC ACGGCGAAGA GGCCAAGGTC ATGGCCGGTG GCCAGAGCCT GATCCCGCTG
CTCAAGCTGC GCTTCGCGTT CCCGAGCCTG GTGGTCGACA TCGGCCGCCT GCCCGGCCTC
GACAAGGTCC GCGAGGAGCA GGGTTACCTG ATCATCGGCG CCCTGTGCCG CCACGCGGCC
CTGGCCCGGC ACCCTCTGCT GGCTCAGCGC TGCCCGCTGA TCACGGCCGC CGCGCCGCAG
ATCGCCGACC CGCTGGTGCG CAACCTCGGC ACCATCGGCG GCTCGCTGGC GCACGCCGAC
CCCGCCGGGG ATTGGGGTTC GGTGATGCTC GCGCTCGACG CCGAGGTGGT CATACAGAGC
CTGCGCGGCA GCCGCAGCGT GCCGGTGCGC GAGTTCTTCC AGGGCGTGCT CAGCACCGTG
CTCGAGCCCG ACGAGCTGCT CACCGAGGTG CGCGTGCCGG TCCCCAGAGC CGCGCACGGC
AGCGCATACC TCAAGCTCGA GCGCAAGGTC GGCGACTTCG CCACCGTGGG CGTGGCCGTG
CACGTCGAGC TCGACGGCGC CAAGATCGCG CGCGCCGGTA TCGCGCTCAC CGCGGTGGGC
CCGCAGAACA TCGAGGTCGG CTCCGCCGTC GCCGTGCTGC GCGGGCACGA GCCCGACGAC
AGCCGCATCG GCGAGGCCGC GCGCCTGGCC GCGGAGGCCG CCGAGCCCGG CGACGACATC
CGCGGCAGCG CCGAGTACAA ACGCGAAGTC GTACGCGTGT ACGTCGAACG CGGCTTGCGC
CAGGCCGTGG CCGACGCGCG CGCGCGCAGC TAG
|
|---|
| Protein sequence | MYPPAFEYAA PDTLAQALAL LAEHGEEAKV MAGGQSLIPL LKLRFAFPSL VVDIGRLPGL
DKVREEQGYL IIGALCRHAA LARHPLLAQR CPLITAAAPQ IADPLVRNLG TIGGSLAHAD
PAGDWGSVML ALDAEVVIQS LRGSRSVPVR EFFQGVLSTV LEPDELLTEV RVPVPRAAHG
SAYLKLERKV GDFATVGVAV HVELDGAKIA RAGIALTAVG PQNIEVGSAV AVLRGHEPDD
SRIGEAARLA AEAAEPGDDI RGSAEYKREV VRVYVERGLR QAVADARARS
|
|---|
| |