Gene Hoch_1973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1973 
Symbol 
ID8544355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2724633 
End bp2726210 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content73% 
IMG OID646386677 
Producthypothetical protein 
Protein accessionYP_003266412 
Protein GI262195203 
COG category 
COG ID 
TIGRFAM ID[TIGR02231] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.788062 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0901572 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCA TCCCGGCAGT AGAGATCCCG GTCGTCGAAG TCACCTTGCT CGAGGATCGC 
GCCCACGTGG TCCGCCGCGG CGAGGTCACG GCCGAGGCCG GCGCCACGCG CGTGCGCGTG
TGCGGCGTGG CCCCGGCGCT GGTCGACAAG AGCCTGGGCG CGCACGTGCT CGCGGGCGAG
GGCGCGGGCG CACCCGAGGG CGTGCGCGTG GTCGACGTGC AGGTGCGCCG GCGGCGCGCG
CTGGCGGTCG CGGAGCGGAG CCAGGATCAC CGCCAGCTCG ACGACGCCCA GCACGCCCTG
TCCCGCGATC TGGCCGCGCT CAGCGACCGC CGCAGCGTGC TCGAGGCCGA GCTGCGCGCG
CTCGACCAGC TCGCCCGCTT GAGCATCGCC GAGATCTCGG AGGACGCGGC CTGGGCGCGC
GGCGAGACCG CGACCTGGAA TCAGCAGCTC GAGGACATCG ACGGCCGCGA GCGCGAGCTG
GTCGACACCC TGCGCCAGCT CCGCTTTGAC GAGCGCGAGG TCGAGGCCCG GCTCGAGCGC
CTCGAGGCCC GCCGCCGGGT CGGCGAGAAC GCGCTGGGCG AGGCCTACGC CGAGCTCGAG
GTCACGCTGA TGGCCGAGCA GCGCGGCCGG GTCAGCCTGC AGATCGACTA CGTCACCCCG
GGCGCGTGTT GGCGTCCGCA GCACAGCGCG CGTCTGCTCG CAGACGACGA CGGCCGCCCG
CGCGTGGAGC TGCGCTCCGA CGGCTGCGTG TGGCAGAACA CGGGCGAGGA CTGGCACGAG
GTCGCGCTGC GCTTCTCGAC CCAGCGTCCG TCGCTCGGCG TGGCCCCGCC GCTGCTGGCC
GAAGACCGGC TCAGCGTGCG CCGCAAGAGC GCCGAGGTGG TCGCCGAAAC CCGCGAGCAG
GAGATCTCGA CCACCGGCGT CGGCACCGAG GTGGTCGAGG TGCCCGAGGT GCCCGGCATC
GACGACGGCG GCGAGGTGGT GAGCCTGCGC GCCGCCGAGC GCGCGTCGAT TCCCTCGGAC
GGCGCGCCCT ACCGGGTCGA GCTGTTCCGC TACCAGAGCG AGGCCGAGAC CGAGCTGCTC
GCGGCCGCGG AGCTGGCGCC GGCCGTGATC CTGCGCAGCG AGCAGGTCAA CCGCTGCGCG
CATCCGCTGC TGGCCGGGCC CGTGGATCTC ATCCGCGAGG CCGGCCTGGT CGGCCGCAGC
TCGGTGCTGT ACATCGCCCC GGGCGAGCGC TTCGAGCTGG GCTGGGGGCC CGACACCTCC
CTGCGCGTGC ACCGCCGCGA CGAGCGCCTG GCCGATGAGA GCCGCATGCT CAGCGCGTGG
ACCGTGCAGC GCCACAAAGT CGTGGTGCGC CTGAGCAACA TCGGCGATGA GCCCAAGCAG
ATCCGCGTCA AGGAGCGCGT CCCGGTGTCC GAAATCGAAA AAGTTCAGAT TTCGGTCCAC
GCGGGCGAGA CCACGGCGGA CGCGCGTCCC GATGCCGATG GCATTCTCGA GTGGCGCGTC
GATCTACCCG CGTTCGGGCG AGACAGCGTG GTCCTGCGCT TCGACGTCAA AAAGCACGAC
GACGTGCGCG GTTTGTAG
 
Protein sequence
MSTIPAVEIP VVEVTLLEDR AHVVRRGEVT AEAGATRVRV CGVAPALVDK SLGAHVLAGE 
GAGAPEGVRV VDVQVRRRRA LAVAERSQDH RQLDDAQHAL SRDLAALSDR RSVLEAELRA
LDQLARLSIA EISEDAAWAR GETATWNQQL EDIDGREREL VDTLRQLRFD EREVEARLER
LEARRRVGEN ALGEAYAELE VTLMAEQRGR VSLQIDYVTP GACWRPQHSA RLLADDDGRP
RVELRSDGCV WQNTGEDWHE VALRFSTQRP SLGVAPPLLA EDRLSVRRKS AEVVAETREQ
EISTTGVGTE VVEVPEVPGI DDGGEVVSLR AAERASIPSD GAPYRVELFR YQSEAETELL
AAAELAPAVI LRSEQVNRCA HPLLAGPVDL IREAGLVGRS SVLYIAPGER FELGWGPDTS
LRVHRRDERL ADESRMLSAW TVQRHKVVVR LSNIGDEPKQ IRVKERVPVS EIEKVQISVH
AGETTADARP DADGILEWRV DLPAFGRDSV VLRFDVKKHD DVRGL