Gene Hoch_1939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1939 
Symbol 
ID8544321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2669132 
End bp2669566 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content66% 
IMG OID646386643 
Producthypothetical protein 
Protein accessionYP_003266378 
Protein GI262195169 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.429795 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0229978 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTACG AAGAAGCCGA AGACCTGGTC ACTCGATTCG AGCAGGGCAG CTATCCCGCC 
GCGTCGTTTT CGCACTACGC GCACGCGGTG ATGGCGCTCT GGTACACCTA TCACCAGCCG
CTGGCGCAGG CGCGCGCGTC CATCAAAGAC GGGCTGCGGC GCTATCTGGT CGCAATCGGC
GTGCCCCAGA CCGAGGACGC CGGTTACCAC GAGACCGTCA CCGAGCTGTT CTTCCAGCTC
ATCGTGCAGT ACCAGCTACG CTTTCCCGAG CGCGATTTCG CCGCGCTGCT GGCCGGGCTC
GAGCGCCAGC CCTTTCTCGA AAAACACTTC ACGCGCCGCT ACTACGACGA TGCGCGGCTG
ATGAGTCGCG AGGCCCGGGC CAGCTTCCTG GCGCCCGAGC GCGCGCCGCT GCTGGGCTGC
GAATTCCGTC CCTGA
 
Protein sequence
MTYEEAEDLV TRFEQGSYPA ASFSHYAHAV MALWYTYHQP LAQARASIKD GLRRYLVAIG 
VPQTEDAGYH ETVTELFFQL IVQYQLRFPE RDFAALLAGL ERQPFLEKHF TRRYYDDARL
MSREARASFL APERAPLLGC EFRP