| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1933 |
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| Symbol | |
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| ID | 8544315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 2655832 |
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| End bp | 2657784 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 646386638 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_003266373 |
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| Protein GI | 262195164 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.77937 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.846715 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGTCCT CCATCTCGCA GGAGCTGACG GCGGCGTACG AGTTGCTTGC CCACCCGCTG
TGGGTATTCG ACGTGGAGAC GCTGAGCATG GTGTGGGCCA ACCAGCCGGG GCTGCGCATG
TGGCGCGCCG ACGACCTCGA CGAGCTGCTG GCGCGCGACT ACGCCGCCGA CATCAGCGAG
GCCGCGCAGC GGCGTCTCAT GGGCACCTTG CACCGCTGCC TGCAGGGCGA GCGCATCCGC
GAGCGCTGGA CCCTCTACCC CCTGGAGGAC ACGCCCGTGA CCGTGGACTG CGGGCTGGCG
GCGGTGCCGC TCGAGGACGG CCGCACCGCT CTGCTCATCA GCGGCATGCC GGTGCAGGCC
AGCGAGATCG CGGCCGAGAA TCAGCGCGGT CTCGAGACCT TGCGCCACCT GCCGCTGGCG
GTGTCGCGCT TCGACGCGGG CGGCGCGCTG GTGTTTCAGA ACCCGGCCGC GGCCAGCGCC
TTCGGCCCCG AGGACGGCCC GCACGCGCGT CTGCTCGAGC GCTTTGCCGA TCGCGAGCAC
GGCGCCGCGG CGCTGCGCGA GGCGCGCGCG GGCGCCATCG TGCGCACCCA GACCCGTCTG
CGCACCGGCG CGGGCGAGCG CTGGCACGAT GTCGAGCTGC GTCAGGGTCG CGACCCCGTG
ACCGGCAAGC CGCTGCTGCT GTTCATGGCC GGCGACATCT CCGAGCTCAA GCAGGCCGAG
GCCGAGCTGC GCGCGGCCAA GGAGCAGGCC GAGGCCGCGG CGCGGGTCAA GAGCGAGTTT
TTAGCGACCA TCTCGCACGA GATGCGCACG CCGCTGCACG GCATCATCGG CTTCGGCGAT
CTGCTGGCAC ACAGCCACCT CGACCCGCAG CAGCGCGGCT TCCTCGACTC GCTGCGCGAG
TCGGCGCGGC TGCTGTTTCG CCTGATCAGC GACGTCCTCG ACCTGGCCCA GATCGAGGCC
GGACGCATGC ACTTCGAGGA CCGCGCCATG GATCTCGAGG CCCTGATCGC CCGGGTGCGC
GACGTCATCG CCTTTCAGGC CGCCGAGAAG CGTCTGGTCC TCGAGGCCCA GCTCGACCCC
GAGCTGCCGC GCCACCTGCG CGGCGACGCG CTGCGCATCG AACAGGTGCT GGTCAACCTG
CTCGGCAACG CGCTCAAGTT CACGCCCGCC GGCCGCGTGA GCTTGCGCGT GCGCTGCGTC
CCCGAGTGCG CGGGCGAGGA CGCGCTCGAG TGCGCGAGCG CAGCCGGCCG CTGCCTCGGC
GACGTGCACC GCCTGCGCTT CGAGGTCCGC GACACCGGCG TCGGGATTTC GTCCGATCGT
CTGAATATCC TCTTCGAGCC CTTCACCCAG CTCGACACAT CGGCGTCGCG CGCCATCGGC
GGCAGCGGTC TGGGCCTGGC CATCTGCAAA CGCCTGGTCG AGGGCATGGG CGGTGTCATC
GGCGTCGCCA GCACACCGGG GAAGGGGAGC TGCTTCTGGT TCGAGCTGTC GCTGGCCGCG
GCCGATACCG CGCGCGCGCC TGCGGCCGAG CGCGAAGGCG GCGCCGGCGC CAGCGGCACG
AGCGAGGCCG AGGCCGAAGC CGAGAGCCGT CTGCACGTGC TGGTCGTGGA CGACAACGCG
CTCAATCAGA CCTTGGCGCG CACCCTGCTG CAGCGCCGCG GCCACCGCGT CACCGTGGCC
GAAAACGGCC AGCAGGCGGT CGCCCTGGTC GCGCGTGGCT CCTTTGACGC CGTGCTCATG
GACGTGCACA TGCCGACCAT GGACGGCCTC GCGGCGACGC GCGCCATCCG CGCCATGGGC
CTGTCGGCCA GCCAGCTCCC GATCGTCGGC TTGACCGCCA GCGTGGTCAA CGACAACCGC
GAGGAGTACC TCGCCTCGGG CATGAACGAC TGCATCGGCA AGCCATTCCG CGTGGCCGAG
CTGTTCGCCG TGCTGTCGCG CCAGCGCCGC TGA
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| Protein sequence | MRSSISQELT AAYELLAHPL WVFDVETLSM VWANQPGLRM WRADDLDELL ARDYAADISE
AAQRRLMGTL HRCLQGERIR ERWTLYPLED TPVTVDCGLA AVPLEDGRTA LLISGMPVQA
SEIAAENQRG LETLRHLPLA VSRFDAGGAL VFQNPAAASA FGPEDGPHAR LLERFADREH
GAAALREARA GAIVRTQTRL RTGAGERWHD VELRQGRDPV TGKPLLLFMA GDISELKQAE
AELRAAKEQA EAAARVKSEF LATISHEMRT PLHGIIGFGD LLAHSHLDPQ QRGFLDSLRE
SARLLFRLIS DVLDLAQIEA GRMHFEDRAM DLEALIARVR DVIAFQAAEK RLVLEAQLDP
ELPRHLRGDA LRIEQVLVNL LGNALKFTPA GRVSLRVRCV PECAGEDALE CASAAGRCLG
DVHRLRFEVR DTGVGISSDR LNILFEPFTQ LDTSASRAIG GSGLGLAICK RLVEGMGGVI
GVASTPGKGS CFWFELSLAA ADTARAPAAE REGGAGASGT SEAEAEAESR LHVLVVDDNA
LNQTLARTLL QRRGHRVTVA ENGQQAVALV ARGSFDAVLM DVHMPTMDGL AATRAIRAMG
LSASQLPIVG LTASVVNDNR EEYLASGMND CIGKPFRVAE LFAVLSRQRR
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