Gene Hoch_1926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1926 
Symbol 
ID8544308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2645899 
End bp2646747 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content68% 
IMG OID646386631 
ProductNADH-ubiquinone/plastoquinone oxidoreductase chain 6 
Protein accessionYP_003266366 
Protein GI262195157 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.856585 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGGT CGACACTCGA GACGCCACGG GCGTCCGCAC CAAAGCGCTT CGCGCTGCTC 
ACGGCGCTGG TCCTGATGCT CGCGGGGGTG TTCGCGCCCG CCGCCGCGTG GGCCGTGCAA
GAGCAAGCGC CGAGCGCGGA ACCTGCGGCA GCGGCTGCCG CGGCCGATAC GGCCGGGGCC
GAGATGGCCG GGGCCGAAGC GGCCGAAGCC GAGATGGCCG CCGCGTTGGA GTCCGCCAGC
GACCGCGATG GCGCCGCCAG CATCGGCGTC GGGGCGTCGC TGATGTTCTG GCTGTTTGCG
CTGCTCACCG TCGGCGGCTC GATCTTCGTC ATCACCCGCC GCAACCTGAT CTCGGCGGTG
ATGGGCATGG TCGGCACCTT CTTCGCCATC GCCGCGGTCT ACACCATGCT CTTCGCCCAC
TTCCTGGCGG CGATTCAGGT GCTGGTGTAC GCGGGCGCCA TCATGGTGCT CTTCGTGTTC
GTCATCATGA TTCTCAACAA GCCCGAGGAT GAGCCCTGGG GCCGCTCGGG AATCATCGGC
AACGTGCTCG GTTCGGCCCT GGTCGCCTAT CTGCTGTGGC GCATCGGCGC CGTGCTGTGG
GCGGTCCCGG TGTCGCCCGC GCAGCTCCTG CCGCCGGGCG GGGTCACGGT CGTCACCGGC
GTCACCGAGA CGGTGCACGA CTACGGTTCG ACCATGGCCA TCGGCCAAAA CCTGTTTCGC
GATTATCTAT TTCCGTTTGA AGCTGTCTCC CTCGTGCTCC TCATCGCCGT GGTAGGTGCG
CTGGCCGTTG CCCGGCCGCA TGAAGCGCCG CCCCCGGCCA TGGAAGCCGA GCAGACCACG
AACGCTTGA
 
Protein sequence
MTGSTLETPR ASAPKRFALL TALVLMLAGV FAPAAAWAVQ EQAPSAEPAA AAAAADTAGA 
EMAGAEAAEA EMAAALESAS DRDGAASIGV GASLMFWLFA LLTVGGSIFV ITRRNLISAV
MGMVGTFFAI AAVYTMLFAH FLAAIQVLVY AGAIMVLFVF VIMILNKPED EPWGRSGIIG
NVLGSALVAY LLWRIGAVLW AVPVSPAQLL PPGGVTVVTG VTETVHDYGS TMAIGQNLFR
DYLFPFEAVS LVLLIAVVGA LAVARPHEAP PPAMEAEQTT NA