Gene Hoch_1910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1910 
Symbol 
ID8544292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2622141 
End bp2623325 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content69% 
IMG OID646386615 
Productalanine dehydrogenase/PNT domain protein 
Protein accessionYP_003266350 
Protein GI262195141 
COG category[C] Energy production and conversion 
COG ID[COG3288] NAD/NADP transhydrogenase alpha subunit 
TIGRFAM ID[TIGR00561] NAD(P) transhydrogenase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.898969 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTAG GAGTTCCCAA GGAGACGCTG CCGGGTGAGC GACGCGTAGC GCTCACGCCC 
ACTGTGCTGT CGCCGCTGAC GCGCGCAGAC GTGAAGATTC ACGTCGAGAG CGGCGCCGGC
GTCGAGGCCG GCTATCCCGA CGCGGCGTTC GAGAAAGTCG GCGCAGTCAT CGTCCCCGAC
CGGGCCAAAC TGTTCGCCGA AGCCGACGTC ATCACGCAGG TGAACCTGTA TTCGAATAAC
CCCGAGGCGG GTCGCGACGA CCTCGCGCTG ATGCGCGAGG GCCAGGTGCT CATCGGCGCC
GCCGACCCGC TCGGCGGCAC CGCTCAGGTG CAGGAGCTCG CGGCGACCAA GGCCACCGCC
TTCGGCCTCG AGTTGGTACC GCGCATCACG CGCGCCCAGA GCATGGACAT CCTCTCGTCC
ATGGCCACCG TCGCCGGCTA CAAGGCCGTG CTGCTGGCGG CCACGCGGCT GCCGCGCTTC
TTCCCGATGT TCATGACCGC GGCGGGCACC ATCCAGGCCG CCAAGGTGTT CGTCATCGGT
GCCGGCGTGG CCGGACTGCA GGCCATCGCC ACCGCCAAGC GCCTGGGCGC CACGGTGCGC
GCCTACGACG TGCGCCCGGT GGTCAAGGAC CAGGTCCAGA GCGTCGGCGG CACCTTCGTC
GAGCTCGAGC TCGAGACCAA CGCGGCCGAG GACGCGGGCG GCTACGCCAA GGCGCAGGAC
GAGCGCTTCT ATGAGAAACA GCGCGAGCTG ATGGCCAAAG AGGTCGCGGC CAGCGACGTG
GTCATCACCA CCGCGGCGAT TCCCGGCCGC AAGGCGCCCA TCCTCATCAC CGCCGACGCC
GCGCGCGGCA TGTCGCCGGG CTCGGTCATC GTCGACCTGG CGGCCGAGCG CGGCGGCAAC
TGCGAGCTGT CGCAGGCCGG CGTGGACGTC GTCGACAGCG GCGTGCTCAT CCTCGGCCCG
GTCAACCTGG CCACCACCAT GCCGTTCCAC GCCAGCCAGA TGTACTCGAA GAACGTCGTG
ACCTTCCTCA TGCACCTCAT CAAGGACGGC GCGGTGCAGC TCGACATGAG CGACGAGATC
ACCACCGGCA CGTTGATGTG CAAGGACGGC GAGGTGGTTC ACCCGCGGCT GCGCGACATC
CTCGGCCTCG CGGCCCCCGC AGCAGAAGGA GAGGCAGCGT CATGA
 
Protein sequence
MIVGVPKETL PGERRVALTP TVLSPLTRAD VKIHVESGAG VEAGYPDAAF EKVGAVIVPD 
RAKLFAEADV ITQVNLYSNN PEAGRDDLAL MREGQVLIGA ADPLGGTAQV QELAATKATA
FGLELVPRIT RAQSMDILSS MATVAGYKAV LLAATRLPRF FPMFMTAAGT IQAAKVFVIG
AGVAGLQAIA TAKRLGATVR AYDVRPVVKD QVQSVGGTFV ELELETNAAE DAGGYAKAQD
ERFYEKQREL MAKEVAASDV VITTAAIPGR KAPILITADA ARGMSPGSVI VDLAAERGGN
CELSQAGVDV VDSGVLILGP VNLATTMPFH ASQMYSKNVV TFLMHLIKDG AVQLDMSDEI
TTGTLMCKDG EVVHPRLRDI LGLAAPAAEG EAAS