| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1908 |
|---|
| Symbol | |
|---|
| ID | 8544290 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 2620294 |
|---|
| End bp | 2621853 |
|---|
| Gene Length | 1560 bp |
|---|
| Protein Length | 519 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 646386613 |
|---|
| Product | NAD(P)(+) transhydrogenase (AB-specific) |
|---|
| Protein accession | YP_003266348 |
|---|
| Protein GI | 262195139 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1282] NAD/NADP transhydrogenase beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAGCC CTGACCAAAT GCTCTCCCTG CTCGCAGCGG GCACCCACTT CACAGCCGAA
GACGGCGTGA AGCTGGCGTA TCTCCTCGCT GCGGTGCTGT TCATCCTCGG CCTCAAGGGC
CTCACCCACC CGCGCACCGC CGTGCGCGGC AACTTCCTCG GCGCCCTCGG CATGCTGGTC
GCCGTCGCCG CCGTGCTCTT CGAGCAGGAG ATTCTCGGCA TCCCGGGCCT CATCGGCGGC
ATCGCGGCCG GCGGCGTCAT CGGCGTCATC CTGGCCGCGC GCGTGCAGAT GACGGCCATG
CCGCAGCTCG TCGCCATCTT CAACGGCTTC GGCGGCGCCG CCTCGGCGCT GGTCGCCGCG
GCCGAATACG GCGCCATCGA CAGCCTGGCC GACTTCCTGC GCAAAGCCCC AGCCGGCCTG
GGCGAGACGC TCGGCGCCGC GGCCGTGCAG AACGGCGTCG ATCCCGGCGG GATGCTCAAG
ACCACCTACT TCCAGCTCCT CAACGGCATC GATCAGATGG GCGTGCACGC GCCCGAGACC
ATCGCCATCG GCTTCGCGGC CATGGTCGGC GCGGCCACCT TCACCGGCTC CATGATCGCC
TTCGCCAAGC TCCAGGAGCT CATCAGCGGC AAGGTCTACA ACATCCCCGG CAGCCAGGCG
ATCACCCTGC TGCTCACCGC GGGCTGCATC GGCCTGTGCG GCTACCTGCT GTTCGCGCCC
TCGCTGATGC TGTTCTGGGC GCTGCTCGGC GCGGCCTCGC TGCTCGGTAT CTTCCTGGTG
CTGCGCATCG GCGGCGCCGA CATGCCCGTG GTCATCGCCC TGCTCAACTC GTACTCGGGC
ATCGCGGCGG CCGCGGCCGG CTTCGTGCTC GGCAACATCG CGCTCATCAT CTCGGGTTCG
CTGGTCGGCG CCTCGGGCAT CATCCTCACC GCCATCATGT GCAAGGCCAT GAACCGCTCG
CTGGGCAACG TGCTCTTCGG CGGCGGCGCG CCCAAGGCCG AGGGTGAGCA GGAGGACATC
TACACCGGCA AGATCAAGGA GACCGACTCC GACGAGGTCG CCATCCTGCT CGACGCAGCG
CAGCGCGTGG TGTTCGTGCC CGGCTACGGC ATGGCCGTGG CCCAGGCCCA ACACGCCGTG
CGCGAACTGA CCAACCAGCT CAAGAAGCGC GGCGCCACGG TCGAGTTCGC CATCCACCCG
GTCGCCGGCC GCATGCCGGG TCACATGAAC GTGCTGCTCG CGGAAGTCGA CATCCCGTAC
GACGACCTCA AGGAGATGGA GGAGATCAAC CCCACGCTCG CCGAGGTCGA CGTCGCCATC
GTGCTGGGCG CCAACGACGT GGTCAACCCG ATGGCGCGCG ACGAGCCCGA CTGTCCGATC
GCGGGTATGC CGATCATCGA CATCGACCGC GCCAAGACCG TCATCATCAT CAAGCGCAGC
CTGAGCCCGG GCTTCGCCGG GATCCCCAAC CCGCTGTTCG CCAACGACAA CTCCCTGATG
CTCTTCGGCG ACGCCAAGAA GGCGCTGATG GGAGTCGTGA GCGCCCTCGA AGAGTACTAG
|
|---|
| Protein sequence | MRSPDQMLSL LAAGTHFTAE DGVKLAYLLA AVLFILGLKG LTHPRTAVRG NFLGALGMLV
AVAAVLFEQE ILGIPGLIGG IAAGGVIGVI LAARVQMTAM PQLVAIFNGF GGAASALVAA
AEYGAIDSLA DFLRKAPAGL GETLGAAAVQ NGVDPGGMLK TTYFQLLNGI DQMGVHAPET
IAIGFAAMVG AATFTGSMIA FAKLQELISG KVYNIPGSQA ITLLLTAGCI GLCGYLLFAP
SLMLFWALLG AASLLGIFLV LRIGGADMPV VIALLNSYSG IAAAAAGFVL GNIALIISGS
LVGASGIILT AIMCKAMNRS LGNVLFGGGA PKAEGEQEDI YTGKIKETDS DEVAILLDAA
QRVVFVPGYG MAVAQAQHAV RELTNQLKKR GATVEFAIHP VAGRMPGHMN VLLAEVDIPY
DDLKEMEEIN PTLAEVDVAI VLGANDVVNP MARDEPDCPI AGMPIIDIDR AKTVIIIKRS
LSPGFAGIPN PLFANDNSLM LFGDAKKALM GVVSALEEY
|
|---|
| |