Gene Hoch_1896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1896 
Symbol 
ID8544278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2606805 
End bp2607068 
Gene Length264 bp 
Protein Length87 aa 
Translation table11 
GC content64% 
IMG OID646386601 
Producttwin-arginine translocation protein, TatA/E family subunit 
Protein accessionYP_003266336 
Protein GI262195127 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1826] Sec-independent protein secretion pathway components 
TIGRFAM ID[TIGR01411] twin arginine-targeting protein translocase, TatA/E family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.431023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGGTT TACCGGAAAT GCTCGTCATC CTCGCGATCG TTCTGCTCAT CTTCGGAGCG 
GGAAAGCTGC CCGCGATCGG TGATGCCCTC GGACGCAGTA TCAAGAACTT CCGCCGCGCG
ACCACGCCGC AGGACGAGAT CGACGTGACC AAGCGCGATG AGCTGGACGA CAACAAGCGC
GGCGAGCTGC ACGAAGGCCG CAGCGACGTG GCCGACGCCG AGGTCGTGTC CACCTCGCGT
CCCGCCGCCA AGAAAGTCGA CTGA
 
Protein sequence
MPGLPEMLVI LAIVLLIFGA GKLPAIGDAL GRSIKNFRRA TTPQDEIDVT KRDELDDNKR 
GELHEGRSDV ADAEVVSTSR PAAKKVD