| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1895 |
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| Symbol | |
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| ID | 8544277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 2604400 |
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| End bp | 2606481 |
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| Gene Length | 2082 bp |
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| Protein Length | 693 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 646386600 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_003266335 |
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| Protein GI | 262195126 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACATCA CCCCATCGAC AGCGCCGCCC GCCGCGCTCA CGACACCAGC GCCATCCCCG
GCGGAGCGCG CGCGGCCCAC CCTGCGCCGA GCCGTGCGGC TGGCGCTGGG CCTGGCGTTC
GCGCTCGCTC CCGTGCATGC CCTGGCCGAG CCGCAGAACG ACGCCCTCCC GCTGGCCCCG
GGCACGCAAC TGGTGCCGCC GGGCCCGGGC TCGCCCGCGG TCGCCCCGCT CGAGACCGAC
CCCGGCCAGC GCCGCGCCAT CCGCGGCTGC GAGGTCGAGG ACAACTGCCG CGGCCACGCG
CTCACCGGCC TGCGCGAGTT CGAGCTCGAG GCCTTTGGCC CAGGCCCGGG CGAGCCCGGC
TTACCCTGGC TCGACGACCC CTACGGCCAC GAGCGCGCAT CCCGCGGTCG CGGCGTGGCG
CGTGCGCGGA CGGTCGCCCG CCCCAGCGAG CTGCGCCCCG ATCTGCCCTG GCTCGACGAG
CTCGAGCTGC CCGATCTGCC GGTGCGCTGG CACGAGCGCG TGATCCGCTA TCTCGAGTTC
TACAAAGACG ATCCCCGCGG CCGCAACATC ATGCGCGCCT GGCTGCGCCG CCAGGGCCGC
TTCCGCGCGC TCATCGTCGA GCGCCTGCGC CGCGCCGGTC TGCCCGAGGA CCTGCTGTAC
GTGGCCATGA TCGAGTCGTC TTACGACCCG CATACGCGCT CACGCGTGGG CGCTGGCGGG
CTGTGGCAGT TCATGCCCGC GGGCGGTCGC ATCTACGGGC TGTGGATCGA TCGCTGGATC
GACGAGCGCA GCGACCCGGT GCGCTCCACC GAGGCCGCGT GCCTGTACTT CGCCGATCTG
TACCAGCGCT TCGGCGACTG GCATCTCGCT CTGGCCGCCT ACAACGCCGG CTACGGCGCC
ATCCTGCGCA GCGTGACCCG CTACAACACC AACGACTACT GGCGCCTGCT GGAGTACGAA
AACGCGCTGC CCTGGGGCAC CAGCCTGTAC GTGTCCAAGA CCATGGCCGC CGCCATCGTC
GGCCGCAATC GCGCCTTCTT CGGCTTCGAG GACATCGACG AAGCCGAACC CATGCGCTGG
GACGAGGTCT CGGTGCCCAA ATCCGTGCCG CTCGGCGCCA TCGCGCGCGC GGCCGGCGCC
AGCGTCGAGG TCATCCAGGA GCTCAATCCC CAGCTCCACC GCAAGCGCAC GCCGCCGACC
ATGAGCGGCT ACGTGATGCG CGTCCCCGCC GGCAGCGGCC CGCTGTTCGC CACCCGCTAC
CCGCAACTGC GCGGCGACTG GGATCGCTAC GACGCCTACG TGGTCGCCCA CGGCGAGCGC
ATCGAGGATA TCGCCACGGT GCACGGCATC TCGCGCCGCA AGCTGATGTC GCTCAACGGT
ATCGAACACG AGTCCGAAAT CGCCGGCGGC ATGGTCCTGG TGGTGCCCCG GCTCAGCGAC
GAGGACAAGG CCAAGAACCG CGCCGAGGCC GAGGAAGACC TGTACAGCTC GGGCGTGCCG
CCGGCCGTGG ACGACGAGCT CATGCTGGTC GCGGTGCCCG ATCGCGACGC CCACATCCCG
GGCAAGCGGC GCGTGTTCTA CCGCGTGGTC ACGGGCGACA GCATGTCCCA GGTGGCCCAC
GCGTTCGGCG TGTCCCTGCG CGATCTGGCG CTGTGGAACG ATCTCGGCGC GGGCGCCCAC
CTGCACCCGC GCATGGTGCT GCAGGCCTTC GTCGATCAGG ACTGGGACGG CAACAGCGCC
GAGGGCGCGC CGGTCGCGCT GCTCGATGAC AGCCGCCTGC TCGTGGTCAC CCGCGGCTCC
GAGGAGCACA TCGCGCTCAT GGAGCAGCGC ATCGGCCGCG AGCGCATCAT CTACACGCCC
GAGAAGCCCG AGTCCTTCGA GACCATCGGC CGCAAGTTCG GTCTCGACAG CCGCGACATG
GCGCGCATCA ACAGCCGCCC GCACGACACC GTGGTCGAGC CCGGCGAGGA GGTCGTGGTG
TACAAGGTAG TGGACAAGGA GCGCTCGCCG CGCGCGGCCG ACCAGGCCAA GGCCAAGCGC
CGCAGCGAAG CCCGCCGCAA ACGCGGCAAG AGCAAAAACT AG
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| Protein sequence | MHITPSTAPP AALTTPAPSP AERARPTLRR AVRLALGLAF ALAPVHALAE PQNDALPLAP
GTQLVPPGPG SPAVAPLETD PGQRRAIRGC EVEDNCRGHA LTGLREFELE AFGPGPGEPG
LPWLDDPYGH ERASRGRGVA RARTVARPSE LRPDLPWLDE LELPDLPVRW HERVIRYLEF
YKDDPRGRNI MRAWLRRQGR FRALIVERLR RAGLPEDLLY VAMIESSYDP HTRSRVGAGG
LWQFMPAGGR IYGLWIDRWI DERSDPVRST EAACLYFADL YQRFGDWHLA LAAYNAGYGA
ILRSVTRYNT NDYWRLLEYE NALPWGTSLY VSKTMAAAIV GRNRAFFGFE DIDEAEPMRW
DEVSVPKSVP LGAIARAAGA SVEVIQELNP QLHRKRTPPT MSGYVMRVPA GSGPLFATRY
PQLRGDWDRY DAYVVAHGER IEDIATVHGI SRRKLMSLNG IEHESEIAGG MVLVVPRLSD
EDKAKNRAEA EEDLYSSGVP PAVDDELMLV AVPDRDAHIP GKRRVFYRVV TGDSMSQVAH
AFGVSLRDLA LWNDLGAGAH LHPRMVLQAF VDQDWDGNSA EGAPVALLDD SRLLVVTRGS
EEHIALMEQR IGRERIIYTP EKPESFETIG RKFGLDSRDM ARINSRPHDT VVEPGEEVVV
YKVVDKERSP RAADQAKAKR RSEARRKRGK SKN
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