Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_1885 |
Symbol | |
ID | 8544267 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 2594345 |
End bp | 2595538 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 646386590 |
Product | alanine racemase |
Protein accession | YP_003266325 |
Protein GI | 262195116 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0787] Alanine racemase |
TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.849261 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCCACA CCGTCCGTCC CACCCGCGTC GAGATCGATC TCGACGCCAT CCACGCCAAC GCCCGCGTCT TGCGCGAGGT GTCGCAGGCC GCCCTGTACG CGGTGGTCAA GGCCGACGCC TACGGCCACG GCGCGCGCGT GGTGGCGCGC TCGCTGGCCG AGGTCGGCGC GGCCGAGGGC TTCGCGGTCA GTCTGGTGGA GGAGGGCTGC GAATTGCGCG ACGCCGGCAT CGACGCGCCG ATCCTGGTCA TGGGGCCGGC GCTGCGCGGC GGCGAGGACG AGATCGTCGG CCGCGATCTG ATGGCCGCGC TGTCGAGCTT CGACGACATC GCGCGCCTGG CTGCTGCGGC CGCGCGTCGC GGCGCCCGCC TGCCCGTGCA TCTCAAGGTC GACACCGGCA TGGGACGTCT GGGCATCGCG CCCGCGCGTG TGGGCGAGGC CCTGGATCAC ATCCGCGCCC ACGGCTCGCT CGAGGTGGTC GGTCTGATGA GCCACCTGGC CTGCGCCGAC GGCGACGACC CGGCCGACCC GGGGTGCATG AGTTATGAGC AGATCGCGCG CTTCGACGAG GCCGCGGCCG TGCTCCGCGC CCGCGGACTG CGCCACGTGC GCCAGCACCT GGCCAACAGC TCGGCCACGC TGCTGTTCCC CGAGGCGCGC CGCGATCTGG TGCGCTGCGG GCTGGCGCTG TACGGCAACA GCCAGCAGCC GGAGCGGGTG CCGCGGCTGC GTCAGGGCGT TCGTCTGGTC ACCGAGATCG CCCAGGTGCG CGAGGTCGCG GCCGGTTCCT CGGTGTCGTA CGGGGCGCTG TGGCGGGCGC CTCACGACGC GCGCGTAGCC GTGATTCCCA TCGGCTACGC CGACGGTGCG CCGCGCCGCC TCACCGGTGT CGGCGAGGTC TTGATCGCCG GCCGCCGTTG TCCGATGGTG GGCGCGGTAT CCATGGACAT GACAATGATC GACGTGAGCG CGCTGGGCGG CTCGGTGGGC GAGGGCGACG AGGTGGTGCT GCTGGGCGAG CAGGGCGATG ACGCGATCTC GGTGCACGAG ATGGCGTCCT GGACCGGCCT GTGCGAGTAC GAGGTCACCT GTGGGCTGTC CAAGCGGGTG CCCCGGGTCT ACCGTCAGGC CGAGCGCCCG GTGCGGCGCC GCAGCGCGCG CTGGCAACCG CAGGCCGGAG GCGTCTGGGG ATGA
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Protein sequence | MSHTVRPTRV EIDLDAIHAN ARVLREVSQA ALYAVVKADA YGHGARVVAR SLAEVGAAEG FAVSLVEEGC ELRDAGIDAP ILVMGPALRG GEDEIVGRDL MAALSSFDDI ARLAAAAARR GARLPVHLKV DTGMGRLGIA PARVGEALDH IRAHGSLEVV GLMSHLACAD GDDPADPGCM SYEQIARFDE AAAVLRARGL RHVRQHLANS SATLLFPEAR RDLVRCGLAL YGNSQQPERV PRLRQGVRLV TEIAQVREVA AGSSVSYGAL WRAPHDARVA VIPIGYADGA PRRLTGVGEV LIAGRRCPMV GAVSMDMTMI DVSALGGSVG EGDEVVLLGE QGDDAISVHE MASWTGLCEY EVTCGLSKRV PRVYRQAERP VRRRSARWQP QAGGVWG
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