Gene Hoch_1873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1873 
Symbol 
ID8544255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2580323 
End bp2581921 
Gene Length1599 bp 
Protein Length532 aa 
Translation table11 
GC content72% 
IMG OID646386579 
ProductCarboxylesterase type B 
Protein accessionYP_003266314 
Protein GI262195105 
COG category[I] Lipid transport and metabolism 
COG ID[COG2272] Carboxylesterase type B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.622248 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGTAT CCGTAACTCT CTTTCTTTCC CTGATCCTGG CCGGGGCCAC GGCCTGCGGC 
GCTGACGGCG GCGATGGCGA CGACCCAAAC TCGCTGCGCG TGAGCACCGA GTCCGGCCCG
GTGCTCGGCC GCAGCAGCGA CGGCGTCGCG CGCTTTCGCG GCATCCCCTA CGCCGCGCCG
CCGACCGGGC CGCGCCGCTT CGCGGCCCCC GAGCCGCCGC AGCCGTGGAG CGCGCCGCGT
CAGGCCTTTG CCTCGGGGCC GCCGTGCCCG CAACTCAACG AGGGCGTGTA TCGCGGCGAC
GAGGACTGCC TCACGCTCGA CGTGTGGGCA CCCGCCGACG TCCCCGGCAG CGATGCGCGT
CTGCCGGTGA TGGTGTGGAT CCACGGCGGC GCGCTGGTCA TCGGCGCCGC CGGCGATCCC
ACCTACGACG CCAGCGAGCT GGTGCGCGCG GGCGATGTCG TGGTGGTCTC GCCGCACTAT
CGCCTGGGCG CGCTCGGCTT CCTCGCCACC GCCGCGCTGC GCGACGCCAG CGGCGATGGC
TCGGTCGGCA ACTACGGCCT GCGCGACCAG CTCCGCGCGC TCACCTGGGT GCGCGACAAC
ATCGAACAGT TCGGCGGCGA TCCCGAGCGC GTCACCGTGT TTGGCAACTC GGCCGGCGGC
GGCAGCATCA ACGCGCTGGC CGCAGTCCCG GCCGCGGATT CGCTGTTTCA CGCCGCCATC
GTGCAGAGCG CGCCCAGCGC CGAGAATCTC CCCGAACCCG AGAACGCGGC CCAGGGACCG
AGCAGCTTCG AGCGCTCCGC GCCTCTGGTC GCGGCCGTGG ACTGCACACG GAGCGCGGGC
GCGGACGAGC TCGCGTGTCT GCGCCAGGTG CCCGCGCGGC GGCTGGTGGA AGCCCTCGGC
GAACTCGATC AGGATGACCT GATCGCCCCC GGCTTCGGCG AGGTGGGCCA CACGGTGGAC
GGCGTGCTGC TGCCCGAGCA GCCGCTGGAC GCGATGATTT CGGACAGTGC GCCTCACCGC
CGCTGGATCA TCGGCAGCAC GCGCGAAGAG GCCGGCGTGC TCGGACTCTA TCCCCTGGCG
TTGGCCCTGC TTGTGCCCGG CGTGTACGAG AGCACCGTTG CCGATCTCTT CGGTGAACTC
AGCGCCGCGC TGCTGGCGGT GTATCCGGTC GAGGACTATC CCTCGCCCTT CGATGCCCTG
GTAGCGCTGC TCAGCGAGAG CTACGTCACC TGCCCGGGCC GGCGCCAGGC GCAGGCGCTG
AGCGCGCGCG GCGACGAGGT CTACGAATAC CGCTTCGTCC ACCGCCTCGA CGGCGATCGC
GGCGCCCTGG GTAGCTTTCA TTCCATCGAA GTGCCGCTGC TCTTCGGCAC GCAGGGCGAC
GCGCTGGGCG GGCTGTACGA GGACTACCAG CCGAGCGAGG CCGACCGCGC CGCCGGCGCC
TTGCTGCGCG CGGCGTGGAG CGTCTTTGCC CACGGCGCGG TGCCCGACCC GTCCTGGCCG
CGCGCGCGCG CCGACGCGCT GGTCGATATC GACAGCGCGA TCGCGGTGTC CGAAAACCCC
ACCGAGGGAC GCTGCCAGGC GCTGGCCGCG CCGCTCTAA
 
Protein sequence
MRVSVTLFLS LILAGATACG ADGGDGDDPN SLRVSTESGP VLGRSSDGVA RFRGIPYAAP 
PTGPRRFAAP EPPQPWSAPR QAFASGPPCP QLNEGVYRGD EDCLTLDVWA PADVPGSDAR
LPVMVWIHGG ALVIGAAGDP TYDASELVRA GDVVVVSPHY RLGALGFLAT AALRDASGDG
SVGNYGLRDQ LRALTWVRDN IEQFGGDPER VTVFGNSAGG GSINALAAVP AADSLFHAAI
VQSAPSAENL PEPENAAQGP SSFERSAPLV AAVDCTRSAG ADELACLRQV PARRLVEALG
ELDQDDLIAP GFGEVGHTVD GVLLPEQPLD AMISDSAPHR RWIIGSTREE AGVLGLYPLA
LALLVPGVYE STVADLFGEL SAALLAVYPV EDYPSPFDAL VALLSESYVT CPGRRQAQAL
SARGDEVYEY RFVHRLDGDR GALGSFHSIE VPLLFGTQGD ALGGLYEDYQ PSEADRAAGA
LLRAAWSVFA HGAVPDPSWP RARADALVDI DSAIAVSENP TEGRCQALAA PL