Gene Hoch_1841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1841 
Symbol 
ID8544223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2534702 
End bp2535745 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content75% 
IMG OID646386547 
ProductAlpha/beta hydrolase fold-3 domain protein 
Protein accessionYP_003266282 
Protein GI262195073 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.126037 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0700576 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCGGC TGGCGCGGCT CTTGTGTGCG GTGCCGGCGC CGCTGCAGGA GGCGCTCACC 
GGCGGCCCCA TCGAGCGCGG CGGCCGGCGC TTTGCCTCCG AGCTGTTGCT GGTGCGCGCG
CTGAGCGAGC GCGCCGGGCT GCGGCGACCG GCGAGCGCGC GGCAACTGCG CCAGCAGCAG
AATCTGAGCG CGCGCATCGG CGGCGGCCCG GCCGACCAGC TCGAGACCCG CGAGCTGTGG
ATTGACGGCG AGGTCGGTGC GCTGCGCGCG CGGCACTATG TCTGCGAGCA GGAGCACGCG
CCGCTGGTGG TGTTCTTCCA CGGCGGCGGC TTTGTGTTCG GCGACGTCGA CACCCACGAC
GCGCCCTGTC GGCTGCTGTG CCGTCACGCC GGCGTCCACG TGCTCTCGGT CGAGTATCGG
CTGGCGCCCG AGCACCGCTT CCCGGCCGCG GTCGGCGATG GTCGCGCGGC CCTGCGCTGG
GCCCACGAGC ACGCCAGCGC GCTCGGCGCC GACCCCGCGC GCGTGGCCGT GGCCGGCGAC
AGCGCGGGCG CCAACCTGGC CGCGGTGGTG GCGCATCAGG CCGCGCGCGA TGGCGGCCCG
GCGCCGGTGG CCCAGATTCT AGTGTATCCG CCGCTCGACC GGCGCTCGGC GTGGCCCTCG
CTGAGCGAGT TCGCCAGCGG CTTCTACCTC ACCCGCGACG CCATCGATTG GTTCCACGCC
CAGTACGTGG GCAGCGACGG CCACGACGCG ACCCGCGACG ACCCGCGGCT CAACCCCATG
CGCGCCGGCG ATCTCTCGGC GCTGGCACCG GCGCTGGTGA TCACGGCCGG CTTCGACCCC
CTGCGCGACG AGGGCGAGGC CTACGCCGAC GCCCTGGAGC GCGCGGGCAA CCTGGTCAAG
CGCCGCTGCT TCGACAGCCT GCCGCACGGC TTCTTCAACA TGGTCGGCAT CAGCCCGGTG
TGTCGCAGCG CGGTCATCGC CTTGGCCGAG GACGCGCGCG CGCTGTTCGC CGAAGCCGTC
GCGGCCGCGG AGGCGCAGGC GTGA
 
Protein sequence
MHRLARLLCA VPAPLQEALT GGPIERGGRR FASELLLVRA LSERAGLRRP ASARQLRQQQ 
NLSARIGGGP ADQLETRELW IDGEVGALRA RHYVCEQEHA PLVVFFHGGG FVFGDVDTHD
APCRLLCRHA GVHVLSVEYR LAPEHRFPAA VGDGRAALRW AHEHASALGA DPARVAVAGD
SAGANLAAVV AHQAARDGGP APVAQILVYP PLDRRSAWPS LSEFASGFYL TRDAIDWFHA
QYVGSDGHDA TRDDPRLNPM RAGDLSALAP ALVITAGFDP LRDEGEAYAD ALERAGNLVK
RRCFDSLPHG FFNMVGISPV CRSAVIALAE DARALFAEAV AAAEAQA