| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1838 |
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| Symbol | |
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| ID | 8544220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 2529126 |
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| End bp | 2530799 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 646386544 |
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| Product | methionyl-tRNA synthetase |
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| Protein accession | YP_003266279 |
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| Protein GI | 262195070 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0143] Methionyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.894587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.204358 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACCC TGATCACGGC TGGTCTCCCC TACATCAACG GGATCAAACA CCTCGGCAAC
CTGGTCGGCT CGATGCTGCC GGCCGATGTG TACGCGCGCT TCCTGCGCCA GGAGGGCGAC
GAGGTCCTCT ACGTCTGCGC CACCGATGAG CACGGCGTCC CGGCCGAGCT GGCCGCGCAC
GAGGCCGGGC AGCCGGTCGA GGCCTTCTGC GAAGCCCAGC ACCAGATCCA GGCCGACATC
TACCGCCGCT TCGGCATCGC CTTCGACTAC TTCGGCCGCA GCTCGGCGCC CTCGAACCAC
GAGCTGACCC GCGAGATCTT CTCCCAGCTC GCCGACAACG GCTTCATCGA GAAGCGCGCC
ACGCAGCAGG TGTACTCGCT CGACGACCAG CGCTATCTGC CCGACCGCTA CGTCATCGGC
ACCTGCCCGC GCTGCGGCTA CGAGGCCGCC CGCGGCGACC AGTGCGAGAG CTGCACCACG
CTGCTCGATC CCACCGACCT GATCGAGCCG CGCTCGGCGG TGTCGGGTTC GACCAAGCTC
GAGGTGCGCT CCACCGAGCA CCTCTATCTA TTGCTCTCCA AGCTCGAGCC CACGGTCAAG
GACTGGGTCG AGGAGCAGGG CCAGTGGCCG CCGCTCACCC GCCAGGTCGC GGGCAAGTGG
CTGGGCGAGG GCCTACGCGA CCGCTGCATC ACGCGCAACC TGGCCTGGGG CGTAGACGTC
CCCGGCGAAG AGGAGCTGGT GTTCTACGTC TGGTTCGACG CGCCCATCGG CTACATCGCG
GCCACCCGCG ACTGGGCCGA GAGCAGCGGC CAGCCCGATG CCTGGAAGGC CTACTGGCAG
GACGCCACCG ACGTCCACTA CGTGCAGTTC ATGGGCAAGG ATAACCTGCC CTTCCATACG
ATCATGTTCC CGGCCATGCT CATGGGCGCC AGCAGCTCGT GGAACCTGCC CGACCAGATC
AAGGGCCTCC ACTGGCTCAA CTACTACGGC GGCAAGTTCT CGACCTCGCA GAAGCGCGGC
GTGTTCTCCG ACGCTGCGCT CGAGCTGTTC CCGGCCGACT ACTGGCGCTA CGCGCTCATG
GCCCAGATCC CCGAGACCAG CGACAGCACC TTCACCTGGG AGATGTTCGC GTCGGCCGTG
AACAAGGATC TGGCCTCGGT GCTCGGCAAC TTCGTCAACC GCGTGCTGCG CTTCACCCGC
TCCAAGTTCG GCGAGACCCT GCCCGAGGGC GGCAGCCCGG GCCCGGCCGA GGCCGCGCTG
CAAGAGGAGT GCGAGGCCCA GGTCAAGCTG TTCCGCGCGT CGATGCGCGC GCTCGAGTTC
CGCCGCGCCA TGCAGGCGCT GCGCAAGCTG TGGACCATCG GCAACACCTA CATCGACACC
GAGGCGCCGT GGGCGGCGAT CAAGACCGAC CGCGATCGCG CGGCCGTGGT CATCCGCACC
TGCTTCAACC TGCTGCGCCT GTACGGCGTG AGCGCGCAGC CGATCATGCC GACGCTGTCC
GCGTCCGTGC TCGACGCCCT GCAGCTCAGC GACGCCGAGC GCAGCGGCCA CGCCGGCGAA
CACGTCGACC TCAGCTTGCT CGGTCCCGGA CGTCCGTTCG AGGCCATCCC GCCCCTGGTC
ACCCAGATCG ATGACGACCG CCTCGAGGAG CTGAAGCAAC GCTTCGGCTG TTGA
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| Protein sequence | MKTLITAGLP YINGIKHLGN LVGSMLPADV YARFLRQEGD EVLYVCATDE HGVPAELAAH
EAGQPVEAFC EAQHQIQADI YRRFGIAFDY FGRSSAPSNH ELTREIFSQL ADNGFIEKRA
TQQVYSLDDQ RYLPDRYVIG TCPRCGYEAA RGDQCESCTT LLDPTDLIEP RSAVSGSTKL
EVRSTEHLYL LLSKLEPTVK DWVEEQGQWP PLTRQVAGKW LGEGLRDRCI TRNLAWGVDV
PGEEELVFYV WFDAPIGYIA ATRDWAESSG QPDAWKAYWQ DATDVHYVQF MGKDNLPFHT
IMFPAMLMGA SSSWNLPDQI KGLHWLNYYG GKFSTSQKRG VFSDAALELF PADYWRYALM
AQIPETSDST FTWEMFASAV NKDLASVLGN FVNRVLRFTR SKFGETLPEG GSPGPAEAAL
QEECEAQVKL FRASMRALEF RRAMQALRKL WTIGNTYIDT EAPWAAIKTD RDRAAVVIRT
CFNLLRLYGV SAQPIMPTLS ASVLDALQLS DAERSGHAGE HVDLSLLGPG RPFEAIPPLV
TQIDDDRLEE LKQRFGC
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