| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1832 |
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| Symbol | |
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| ID | 8544214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 2524022 |
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| End bp | 2525152 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 646386538 |
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| Product | TIM-barrel protein, yjbN family |
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| Protein accession | YP_003266273 |
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| Protein GI | 262195064 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.393903 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0707326 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCCCG TGAACTCTGC CAAGCAATCG CCTGAGCCGG TTCCGGGCGC CGCGGCCGCG
GCTGCGGCTA AGGCCGCGGA TGCGGACACG GGCGTCGCCG AGCGGCGCGG TGTCACCGCG
GCGCTCAGCG TCGCGCCCAT GATGGAGTGC ACCGACCGGC ACTTCCGCTA TTTCCTGCGC
CAGATCTCGC GGCACACGCT GCTGTACACC GAGATGATCG TCACCGGGAC CATCATCCAC
GGCGACCGGC CGCGCTATCT CGACTTCTCC GAGGCCGAGC ATCCCATCGC GCTGCAGCTC
GGCGGCGACG ACGCCGAGGC CCTGGCCACC TGCGCGCGCA TCGCCGAGGA CTGGGGCTAC
GACGAGGTCA ACCTCAACGT CGGCTGTCCC TCGAGCCGGG TGAGCAGCGG CAGCTTTGGC
GCGTGTCTGA TGGCCCGCCC CGAGGTCGTG GCGCGCGCGG TCGAGGCCAT GCGCGCGGCC
GTGGCCATCC CGGTGACGGT CAAGCACCGC ATCGGCATCG ACGATCGCGA CCGCTACGAG
GACATGCGCG AGTTCGTACG CGTGGTCGCC GAAGCCGGCG CCGACCGCTT CTCGGTGCAC
GCGCGCAAGG CCTGGCTGAG CGGGCTCTCG CCCAAGGAGA ACCGCGAGGT GCCGCCGCTG
CGCTACGCCG ATGTGCACCG CCTCAAGCGC GAGTTTCCCC ACCTGCCCAT CGAGATCAAC
GGCGGCATCG TCGACCTCGA CAGCGCCCAG GAGCAGCTCG CCCACGTCGA CGCGGTCATG
ATCGGACGCG CGGCCTACAA CACGCCGTGG ATCTTCGCCG AGGCCGACGC GCGCTTCTTC
GGCAGCGTCG CGCCGACGCC GACACAAACG GCCGTGGTCG AGGCCATGAT CGACTACGTC
GAGGCGCAGC GCGGCCGCGG CGTGCCCCTG CACCGCATCA CGCGCCACAT GTTTCAGCTC
TTTGCCGGTC AGCGCGGGGC CCGCGGCTGG CGCCGCTATC TCACCGAGCA GGCCAAGAGC
CGCGACGCCG GGCCCGAGGT GCTGCGCGTC GCCCTGGACC GCTTCCTGGC CGCGTCGCTG
CCGCCCGCGC CCGCGCCCGA GACCGAGAGC ATCGCTGCGT CGGCCGGCTG A
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| Protein sequence | MQPVNSAKQS PEPVPGAAAA AAAKAADADT GVAERRGVTA ALSVAPMMEC TDRHFRYFLR
QISRHTLLYT EMIVTGTIIH GDRPRYLDFS EAEHPIALQL GGDDAEALAT CARIAEDWGY
DEVNLNVGCP SSRVSSGSFG ACLMARPEVV ARAVEAMRAA VAIPVTVKHR IGIDDRDRYE
DMREFVRVVA EAGADRFSVH ARKAWLSGLS PKENREVPPL RYADVHRLKR EFPHLPIEIN
GGIVDLDSAQ EQLAHVDAVM IGRAAYNTPW IFAEADARFF GSVAPTPTQT AVVEAMIDYV
EAQRGRGVPL HRITRHMFQL FAGQRGARGW RRYLTEQAKS RDAGPEVLRV ALDRFLAASL
PPAPAPETES IAASAG
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