| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1822 |
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| Symbol | |
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| ID | 8544204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 2513313 |
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| End bp | 2514716 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 646386528 |
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| Product | nuclease SbcCD, D subunit |
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| Protein accession | YP_003266263 |
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| Protein GI | 262195054 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0420] DNA repair exonuclease |
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| TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.449676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.314842 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTTC TACACACCTC GGACTGGCAC CTCGGGCACA GCCTGCACGA CGTGTCGCGC
GACTATGAAC ACGAGTGCTT TCTGCGCTGG CTCGTGGACA CCCTCGAAGC CGAAGCCGTG
GACGCCCTGC TCATCACCGG CGACATCTTC GACTCGGCCA ACCCGCCGGC CACCGCCCAG
GCGAGCTGGT ACCAGTTTCT GGCCGAGGTC CACGCCCGCC TGCCCGGCCT CGACGTGCTC
GTCATCGGCG GCAACCACGA CTCCGCCGCC CGCCTCGAGG CGCCCAAACC CGTGCTCTCG
GCCCTGCGCA CCCACGTCAT CGGCGCCCTG CGGCGGGGCC CGCGCGACCA GCACGGCCGG
CGTCCGCTCG AGCTTGAGCG CGCCATCGTG CCGCTCCGCG ATCGCGACGG CGAGGTCGCC
GCCATCGTCG CCGCCGTGCC CTTCCTGCGC ACCGCCGACC TGCCGCGCCC GCGCCGCGCC
AGCGCCGACG CCACCGTCGC CAGCGAAGTC ACCGACGCCA GTGACGGCCC AGCCGACAGC
GGCGCCAGCG ACGCGGACGC CGGCGACGAG GAGCTGCGCC GCGACCCGCT CATCGGCGGC
GTGCGCCAGG TCTACGCCGA GGTCCTCGAC GCCGCCCGCG CGCGCCTGCA GCCCGGCCAG
GCGCTGCTGG CCACCGGCCA CTGCTACATG GTCGGCACCG ACATCTCGAC CCTGAGCGAG
CGCCGCATCC TGGGCGGCAA CCAGCACGCC CTGCCGGTGA GCATCTTCCC CGACGACGTC
GCCTACGCCG CCCTCGGCCA CCTGCACAAA GCCCAGCGCG TCGGCGGCCG CGAGGGCGTG
CGCTACGCCG GCTCGCCCAT CCCGCTGGCG CTCGACGAGG CCCGCTACCG CCACCAGGTT
TTGCTCGTGG AGCTCGAGGG CCCGGCCCTG GCCGAGGTGC GCAGCCTGAG CGTGCCGCGC
ACCGTGGACA TCGTGCGCAT CCCCAAGTCC GGCGCGGCCT CGCCCAAGGA GGTCTTCGCC
GCCATCGAGG CGCTGCCCGC GTGGACCCCG GGCGAGGGCG ATCCACAGAA ATCGGACACC
CGTCCCTTTC TCGAGCTGAG CGTGGCCATC GACAAGCCGC GCGCGCAGCT CAAGGGCGAG
GTCGAGGACA AGCTGCGCGG CAAGTGGCCG CGCCTGGCCA AACTCGGCGT GGTCCGCCGC
GGCGACGGCG CGCCTCTGGC CGACGCGCTG CCCACCCGCG AGCTGCGCGA GCTCGACCCC
GAAGAGGTGT TCTTGCGCCG CTACGCGCGC GATCACGCGG GCGCGCCCGA CGACGATCTC
TTGCAGTCCT TTCACCGCGT CCTCGAAGAC GCCTACGCGC AGCGCGGCGA CCAAGCGCCC
GCGCGCGGGG AGCCCGAAGC GTGA
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| Protein sequence | MRLLHTSDWH LGHSLHDVSR DYEHECFLRW LVDTLEAEAV DALLITGDIF DSANPPATAQ
ASWYQFLAEV HARLPGLDVL VIGGNHDSAA RLEAPKPVLS ALRTHVIGAL RRGPRDQHGR
RPLELERAIV PLRDRDGEVA AIVAAVPFLR TADLPRPRRA SADATVASEV TDASDGPADS
GASDADAGDE ELRRDPLIGG VRQVYAEVLD AARARLQPGQ ALLATGHCYM VGTDISTLSE
RRILGGNQHA LPVSIFPDDV AYAALGHLHK AQRVGGREGV RYAGSPIPLA LDEARYRHQV
LLVELEGPAL AEVRSLSVPR TVDIVRIPKS GAASPKEVFA AIEALPAWTP GEGDPQKSDT
RPFLELSVAI DKPRAQLKGE VEDKLRGKWP RLAKLGVVRR GDGAPLADAL PTRELRELDP
EEVFLRRYAR DHAGAPDDDL LQSFHRVLED AYAQRGDQAP ARGEPEA
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