| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1809 |
|---|
| Symbol | |
|---|
| ID | 8544191 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 2498151 |
|---|
| End bp | 2498801 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 646386515 |
|---|
| Product | MotA/TolQ/ExbB proton channel |
|---|
| Protein accession | YP_003266250 |
|---|
| Protein GI | 262195041 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0811] Biopolymer transport proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAATCC TGAAGACCAT TGCCGAAGCA TTCCACGAGG GCGGGTTCGG CATGTGGCCG
ATCCTCGTCT CGTTGATCTT CATCATCGCT ATCACCGTGG AACGCGCCGT GTTCCTGTTC
AAAGCCTCGG TCGATAAAGA CAAGCTGCTG GCGCTGCTCA AGAGCCAGGT CATGAACGGC
AACGTCCAGG GCGCCGTGCA GGTCTGCTCC AGCAACCCGA CGCCGATCAC GCGCATCGTC
CAGGCCGGCC TCTCGAAGTT CAACCGCAGC GACGCCGATG TGCAGGCCGC CATGGACGAG
TCCGCGCTCC GCGAGCTGCC CAAGGTCAAC GCCCGCACCC CGTACCTCGC CATGCTCTCG
AACTTCGCGG TTATGGCCGG TCTGTTCGGT ACCATCGTCG GTATGATCAA GTCCTTCGGT
GCCGCCGCTG GCGCCGACGC CTCGAGCAAG GCGGCCGAGC TCGCCAACGG TATCTCCGAG
GCGCTCAACT GCACCGGCTT CGGCATCTTG GTGTCGCTGG TCGGTCTGCT GGCCTTCTCG
CTGCTCACCG GTAAGACCAC CAAGGTCACC GATGACATCA ACGAGGTCAC GGTTCAGGTC
GTGAACCTGG TCACCTCGCA CCGCACCCAC ATGCAGCAGC CCACGGCCTG A
|
|---|
| Protein sequence | MGILKTIAEA FHEGGFGMWP ILVSLIFIIA ITVERAVFLF KASVDKDKLL ALLKSQVMNG
NVQGAVQVCS SNPTPITRIV QAGLSKFNRS DADVQAAMDE SALRELPKVN ARTPYLAMLS
NFAVMAGLFG TIVGMIKSFG AAAGADASSK AAELANGISE ALNCTGFGIL VSLVGLLAFS
LLTGKTTKVT DDINEVTVQV VNLVTSHRTH MQQPTA
|
|---|
| |