Gene Hoch_1801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1801 
Symbol 
ID8544183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2489343 
End bp2490926 
Gene Length1584 bp 
Protein Length527 aa 
Translation table11 
GC content72% 
IMG OID646386507 
ProductAAA-ATPase-like protein 
Protein accessionYP_003266242 
Protein GI262195033 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0677168 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTTC AGCCTCCCAT CGGTATCGAC GAGTTCCGAC TGCTGCGCGA GCGCCAGCTC 
GCCTACGTGG ACCGCTCGCC GCTCGCGTGC GCGCTCATCG ACCGACCGGG CGCGCACTGT
GTGCTGCTGC TGCAGCCGCC GCGCTTCGGC AAGAGCCTGG CGCTGTCGCT GCTGCGCTGC
TTCTTCGAGA AGCGCGCGGA GGATCTCGCC CACCTGTTCG AAGACCTCGC CGTGTGGCAG
GCGGGCGAGG CCTACCGCGA GCACTTTCAG CGCTACCCGG TGCTGCATCT GCGCCTGGGC
GATCTGCACT GCGCGCACGC GGACGAGCTG CGCGCCGGCC TGCGCGAGAA GCTGCGCGAC
CTGTGCGACG AACACCGCGC CGTGCTCGAC AGCGACGCGC CGAGCGCGCT CGACCGCGAA
CGCATCGCCG CGCTGCTCGA CGGCAGCGCC GCCCCTGAGC TGTTCGCGCG CGCGTTGCGC
GACCTGGCGC GCGTGCTTCA CCGGGTCCAC GGCGAGCCGG TGTTCGTGCT TATCGACGAC
GGCGACCTGC CCCTGCGCGT GGCCCAGCGC CGGGGCTTCG CGCGCGAGGC CCAAGCGCTC
CTGCGCGCGC TCTACGCCGG CGCAGCCCAG GGTAATCCCC ACGTCGCCCG CGTGATCATC
ACCGGCGTCG ATCGCGAACT GGCGCTCGCG GGCAGCGGCC TCGAGGGCGC ACAGGTATTC
GACGTACTGT CCGAGTTTCC GCAAGGCGGG CTCGGCTTCA CCGCGGACGA ACTCGATCTG
CTGCTGGAGC GCGCCGAACG CGAGTCCTCG CTCGAGCTTT TGCAGCGCTG GTACGGCGGC
TACCCGGCGC CCGATGAGCC GCTCAGCAAC CCCTGGTCGG TCATGCGCTA CCTCGCCGAC
AGCGAGGGCC GGCTGCTGCC CTACTGGCTG CTCGCCGGCA TCGACAGCAC CGCGCGGCCG
CTGCTCGAGC GCGAGGCCGA GCAGGTGCGG CCGCTCTTCG AACGCATGTG GGACGGCGAC
GACATCGAGT GCGAGCTCGG TGGCAGCAGC ACGCTCGCCG CCGCGCAGGG CGAGAGCGCC
CGTGGCGAGG CCGGCCGCGA GCACCTATGG CGCACGCTCA TCGCCTGCGG CTATCTGTGC
GCCGAGCGCC TGCCCGGCCG CCCCGGCCAC CCCGAGGTCT ATCGCCTGAG CATTCCCAAC
CGCGAAGTGG CGATGCTGCA CCAGACCGTG ATCCGCGCGT GGCTCGAGTC CGGCGTGCAT
ACCGCCGCGA CCGCGCCTGC ACAGGCGGCA GCGTCGGCCG CCGACCCGGC GACAGACGAC
GACGAAGGGC TACGGCCGTT CCGGCCGCGT CCGGTGCGCC AGCCCTACCT CGGCCCCAGC
GCAGAGCAGC GCGAGCAAGA CGCCGAGGCC TTTGAGAGCC GGCTGGTGCA GTTCTTCGAC
GAAATCCACC AGGACGCGGA CGCGGCCACC GACGCGGACG CGGCCACCGA GGCGGGCGCA
AGCGCCGACG GCGATGGCAT CGCGACGGCC GATTCCGACT CATCGTCCGA AGAAGAAGCG
ACGTCCCCCG AGCGCACGCC CTGA
 
Protein sequence
MTVQPPIGID EFRLLRERQL AYVDRSPLAC ALIDRPGAHC VLLLQPPRFG KSLALSLLRC 
FFEKRAEDLA HLFEDLAVWQ AGEAYREHFQ RYPVLHLRLG DLHCAHADEL RAGLREKLRD
LCDEHRAVLD SDAPSALDRE RIAALLDGSA APELFARALR DLARVLHRVH GEPVFVLIDD
GDLPLRVAQR RGFAREAQAL LRALYAGAAQ GNPHVARVII TGVDRELALA GSGLEGAQVF
DVLSEFPQGG LGFTADELDL LLERAERESS LELLQRWYGG YPAPDEPLSN PWSVMRYLAD
SEGRLLPYWL LAGIDSTARP LLEREAEQVR PLFERMWDGD DIECELGGSS TLAAAQGESA
RGEAGREHLW RTLIACGYLC AERLPGRPGH PEVYRLSIPN REVAMLHQTV IRAWLESGVH
TAATAPAQAA ASAADPATDD DEGLRPFRPR PVRQPYLGPS AEQREQDAEA FESRLVQFFD
EIHQDADAAT DADAATEAGA SADGDGIATA DSDSSSEEEA TSPERTP