Gene Hoch_1797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1797 
Symbol 
ID8544179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2484834 
End bp2486390 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content73% 
IMG OID646386503 
Producthypothetical protein 
Protein accessionYP_003266238 
Protein GI262195029 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000320135 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCTT CCTCCGAGAA ACAATCTGCC CGTCGCGTCC CCGGCTGGGC GTTGGTGCTG 
GTCTGTATCG CGCTGGTCGC GATCACGGTA TTCGTCGCCG GCCGTACGAT CGGTGCGCGC
CCGGCGGGGA CCAGTATCGT CGAGCTGGTC GCCATCGACC GCGAATACGC GGCGCTGGTG
CGCAATACCA ACGAGGAAGG CGATCGCTTC TTCCTCAGCC TGCTGCACAC TGAGCGCGGC
GAGGCCTGGG GCGCGCTGCT GCCGCGATCG GGTCCCTGGG GCGGCCCGCG CGGCAATCTG
GCGGCCACGG CCGACGTGAT CAGCGTGCGC GCGCGCACCG GCGGTGTGCC CTACGCGCAT
ATGTTCGCGG CCGCGCGCGG GGCCAAGCTG GGCCGCTATC GCCTCGACGT CGAGGGCGAC
GAGGAGATGC TCAAGACCCC GCTGCCGGTC GCCGAGGTGC CGCGCGTGGG CGTGGTCGCG
GACGCGGGAC AGTCGTTCGA ATTCCTGCGC CGCGAGGGCG AGGCGGTCAC TGTGGTGGCC
ATCGATCTCG AGCACGGGCG ACGTCTGTGG CGCGCCCATG TCGGCGCCGC CGAGGATGAT
CTGGGCGAGA TGGCGCCGGT GTGGCTGCGG CGCGACGCGC TGCTGGTGTT CACGGGCGGC
AGCCCAGGGA CAGGCGGCCG CCTCGATGTA CTCGCGCGCG ACACCGGGGC GCGCCTGTTC
GAGCCGCTCG AAGACATCGA GGGCGTGCCC TGCGTGCTCG GCGAGCGCGT CTACGCGAGC
GCGCGCGGCC GCATCTGGAT GACCTCGCTG AGCGATGCCG CGGTGCGCGA CCTGGGGCCC
AGCGGCGATG TGCGCGGCAC CGGCGTGTGC GGCCATCGCG GTGAGCGCGA TTTCGTCGTC
GTGTCCGATA AAGATGCTCA GGCCGCGCTG CTGGCGTTCA CGCCCGGTGC GTCTGCGCCT
GTGCCTGTGC CTGCCAACGG CGACGATGGC GACGATGGCG ACGATGGCGA CAGCGACGAG
TTCGCGGTAG AGACCGTGCC CTGGAGCGCG CTGCTGCCGC TCGGCGGCGC CTTGCGCGTC
GATGGCGAGC TGCTGGCGGC TGCGCCCGAC GCCGCGATGC TGGGGACGGG CGCCGCTGCG
CCGAGCTTCG TGCCGTTGCT GGTGGGCGAG GCCGGGGCAC CGCAGCTCAT CATCGTCGAT
CTCGACGAGC TGCGCGTGGT GCGCCGCAGC CAGCCCGCGG CGGCGCTGGC CGGCGCTCGC
ATCGTGCTGG CGGACGGGCG TTTCTACCTG TGGACGCCGG CGCCGCTGCT GGCCGCGTTC
GGCGACCAGG GCGAGATCGC GGCCGCCGTG GCGCTGGACG GCATGGCGCC GGTGTGGCCC
AAGCAGTTCG CCGACGGCCA CGTCTGGGTG TACCGCTCAG ACGACGCCGA GCGGCCGCTG
TGGTTGGTGC TCGAGGGCGC CACGCTGCGC GTGCGCGCGG CCGGCCTGGG CACCGAGGTC
GATGTCGAGC CGCCGGTCTT GAACGACGCG GCCGCGGCGC TGCCGGCTCT GCGCTGA
 
Protein sequence
MSASSEKQSA RRVPGWALVL VCIALVAITV FVAGRTIGAR PAGTSIVELV AIDREYAALV 
RNTNEEGDRF FLSLLHTERG EAWGALLPRS GPWGGPRGNL AATADVISVR ARTGGVPYAH
MFAAARGAKL GRYRLDVEGD EEMLKTPLPV AEVPRVGVVA DAGQSFEFLR REGEAVTVVA
IDLEHGRRLW RAHVGAAEDD LGEMAPVWLR RDALLVFTGG SPGTGGRLDV LARDTGARLF
EPLEDIEGVP CVLGERVYAS ARGRIWMTSL SDAAVRDLGP SGDVRGTGVC GHRGERDFVV
VSDKDAQAAL LAFTPGASAP VPVPANGDDG DDGDDGDSDE FAVETVPWSA LLPLGGALRV
DGELLAAAPD AAMLGTGAAA PSFVPLLVGE AGAPQLIIVD LDELRVVRRS QPAAALAGAR
IVLADGRFYL WTPAPLLAAF GDQGEIAAAV ALDGMAPVWP KQFADGHVWV YRSDDAERPL
WLVLEGATLR VRAAGLGTEV DVEPPVLNDA AAALPALR