| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1794 |
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| Symbol | |
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| ID | 8544176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 2480223 |
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| End bp | 2483120 |
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| Gene Length | 2898 bp |
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| Protein Length | 965 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 646386500 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_003266235 |
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| Protein GI | 262195026 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0332193 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.80092 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGTTA CCAAAGCGGC CATGTCAGTT ACCAAAGCGG CCATGTCAGT TACCAAAGCG
GCTATGTCAG TCACGAAAGC GGCCACGTCA GTCACCAAAG CGCCCACATC GGTCACCAAA
GCGGAACTCG TCGCGATCGC GGGACGGCAT CTCAGCGCGC TCGCCGCCGG GACATGTGAA
CTCACACGGG CCGACGCCGA GCGCGAGGCC GATCCCGAAC TGCGCACGCT GCTTTTGGGA
ATCGTCGAGC TGGCCGAAAA ACAGCGCGCC GAGGCCGCCG AGCGCGCTCG TGCCGAGCTG
CTCGCGACCA TATTTGACGC GTTGCCGCTC AACATTTTTT TAAAAGACGA AGATGGCCGC
TTCCTCGAGG CCAACCGCAG CACCTGCGAG GTGGTCGGCA AGCGGCGCGA GGAGGTGCTC
GGCAGCACCG ACTACGACAT CTTTCCGGCC GCTCTGGCCA AGCGTCTGCG CGAGGCCGAC
CGCCTGGCTC TCGATGAGAA TCGCATCGTC GTCGAGGACG AGCGCCTGCG CCGCCGCACG
GGCGACGCGC AGGAGAAATT ATATTACGCG GCCAAGCTGC CCATGACGCG GCCGAGCGAC
GGCGTCCGCT GCTTGCTCGG CGTCTCGTTT TCGTTCGAGT GGCGCGAGCG CGAAATCGAC
GAGCTGGTCA AGCGCCACGA GTTCGTCCAG CGGGTTCTCG ACCAGTTGTC CCAACCCATC
TGCGTCAAGG ACCGTAGCGG CCGCGTGCTG TTCTCCAACA AGGCGGCCGA CGCGGTGACG
CAGTTCACGG GCGAGGCCAG CGAGGACGAG CGCGAGCGGC GGGTGTTCGA CGATCTCGAC
GAGCTCAGCA GCGAGCTGCC GCTGCCGCTG CCGGGCGGCG GCACCCGCTG GCTGCGCGTG
CGCCGGATGC CGCTGAGCAT CGGCGACAAC GAGGTATATT CGCTGAGCAT CGGCGACGAC
ATCGACGATC GCAAACAGCT CGAGCAGCAG CTCGAGGACG CCGCGTTCAT GATGCAGACG
GTGATCGACG CGAGCCCCGA CTGCGTGATC GTCAAAGACC TCGAGGGCCG CGTCCTGTAC
GTCAACGAGG CCTTTGCGCG CGAGGTCAGC GTGCCCCGCG CCAAACTGGT CGGGCTGTCG
GCCTTCGACG TCCTGCCGCG GGCGCGCGCC GCGGCTCAGG TGGAGCGCGA GCGCATGGTG
GTCGAGGGCG GCGTGCAGGT GCGCACCGAG GTCGCCCGGC CTCGCGACGC GCGCGGCAAG
GTCATCTACG AGCTGTTCGA GCTGCCCATG CGCGACCGCT CGGGCGCGCT CAGCGGTCTC
ATCAGCATCG GCCGCGACAT CACCGACTGG AAGCAGTCCG AGCGCGCGCT GAGCCTGGCG
CATCAGCAGG CCGAGGCCGC GCGCCTGGCC AAGACCGAGT TCTTGGCCAA CATCAGCCAC
GAGGTGCGCA CCCCGCTGAG CGGCATCATC GGTATGACCA GCTTGCTGCG CACCACCGAG
CTCGATGCCG AGCAGGCCGA CTACGTGGCC ACCGTGGAGG CCAGCGGCTC GACCCTGCTC
AACCTCATCA ACGATCTGCT CGACATCTCG CGTCTGGAGG CTGGGCGCAT CGCGCTCGAC
GAGCAGATGT TCGAGCTCAT GCCGTGCGTG ACCCACACGG TGAACCTGGC CAGACCGATG
GCGCGCGAGA AGGGGCTGGC GCTCGATCTC GACATCGCCG AGGGCGTACC GGCCTTCGTG
CTGGGAGACG AGCTGCGTCT GTCGCAGGTG CTGAGCAACC TGGTCACCAA CGCGCTCAAG
TTCACCGAGC AGGGGCGGGT GCTGGTCAAG GTGAGCCCCT GCGGGTACGA GGACGACAGG
ATCCGGCTGC GTTTCGCGGT CCACGACACC GGCATCGGTA TCCCCGAGGA CAAGCGCGAG
GTGCTGTTCG AGCGCTTCAC CCAGGTCGAT ACCTCGACCA CGCGGCGCTA CGGCGGCGCC
GGTCTCGGCC TGGCCATCAG CCAGCATCTG GTCAACGCCA TGGGTGGGCG GATCGAGCTG
CAGAGCCGCG AGGGCGAGGG CTCGTGCTTC TCCTTCGCGC TCAGCCTGCG CCGGCCGGAG
GAAGCGGCCG TGGCCGCGGC GACGGCCGAG GACCTGAGCC GCGATATCGG CCAGCCGATG
CCGCAGTTGC CGGCGCTGCG CATCCTGGTG GCCGAGGACA ACGCCGTCAA CCGCGAGGTC
GCGCTCGGCC TGCTGGCCAA GCTCGGACAC CGCGCCGACG TCGTCGGCAA CGGCGCCGAC
GCGGTCGCCG CGCTCGAACA GCACAACTAC GACATGATAT TCATGGACGT GCACATGCCG
GTGCTCGACG GCCTCATGGC GACGCGCGAG ATCCTCTCGC GCTGGCCGCA GGGCAGGCGT
CCCGTGATCA TCGCGATGAC CGCAGACGCG ATGAACGGCG ATCGTGAGCG ATGTTTATCT
GCGGGCATGC AAGACTACGT GAGCAAACCG GTGTCTATGA AGAACCTCTC CGCCATGCTG
TCGCGCTGGG CCTCGCCGGC GCAGGAAGCC GAAGTCGCAG CCACCATCGA CCGCGAGCTC
TTCGAAGCCT ACGGCGCCGA GCTGATGCGC GAGCTGCTGC AGGCGTTCAC CGATACCGTG
CCCGCGCGCA TCGAGGCGGT GAAGCAGCAC TTCGCCGCTG GCGAGGCGCA CGCGCTGGCC
GACGAGGCGC ACGCGCTCAA GGGCGCTGGC CTCAACCTCG GCGCCCACCG CTTCGCCGAG
GTCTGCCGCG AGCTCGAGAG CCGCGGCCGC GAGGGCGCGA TCGCCGGCCT CGAAGACCGA
CTCGAGCAGC TCAGCCAGGC CTACGTCAAC ACCCGCGTGG CGCTCGCTAC CCTGCTCAAG
CACGCCGAGG GCGGCTGA
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| Protein sequence | MSVTKAAMSV TKAAMSVTKA AMSVTKAATS VTKAPTSVTK AELVAIAGRH LSALAAGTCE
LTRADAEREA DPELRTLLLG IVELAEKQRA EAAERARAEL LATIFDALPL NIFLKDEDGR
FLEANRSTCE VVGKRREEVL GSTDYDIFPA ALAKRLREAD RLALDENRIV VEDERLRRRT
GDAQEKLYYA AKLPMTRPSD GVRCLLGVSF SFEWREREID ELVKRHEFVQ RVLDQLSQPI
CVKDRSGRVL FSNKAADAVT QFTGEASEDE RERRVFDDLD ELSSELPLPL PGGGTRWLRV
RRMPLSIGDN EVYSLSIGDD IDDRKQLEQQ LEDAAFMMQT VIDASPDCVI VKDLEGRVLY
VNEAFAREVS VPRAKLVGLS AFDVLPRARA AAQVERERMV VEGGVQVRTE VARPRDARGK
VIYELFELPM RDRSGALSGL ISIGRDITDW KQSERALSLA HQQAEAARLA KTEFLANISH
EVRTPLSGII GMTSLLRTTE LDAEQADYVA TVEASGSTLL NLINDLLDIS RLEAGRIALD
EQMFELMPCV THTVNLARPM AREKGLALDL DIAEGVPAFV LGDELRLSQV LSNLVTNALK
FTEQGRVLVK VSPCGYEDDR IRLRFAVHDT GIGIPEDKRE VLFERFTQVD TSTTRRYGGA
GLGLAISQHL VNAMGGRIEL QSREGEGSCF SFALSLRRPE EAAVAAATAE DLSRDIGQPM
PQLPALRILV AEDNAVNREV ALGLLAKLGH RADVVGNGAD AVAALEQHNY DMIFMDVHMP
VLDGLMATRE ILSRWPQGRR PVIIAMTADA MNGDRERCLS AGMQDYVSKP VSMKNLSAML
SRWASPAQEA EVAATIDREL FEAYGAELMR ELLQAFTDTV PARIEAVKQH FAAGEAHALA
DEAHALKGAG LNLGAHRFAE VCRELESRGR EGAIAGLEDR LEQLSQAYVN TRVALATLLK
HAEGG
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