| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1793 |
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| Symbol | |
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| ID | 8544175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 2476961 |
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| End bp | 2479918 |
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| Gene Length | 2958 bp |
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| Protein Length | 985 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 646386499 |
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| Product | SNF2-related protein |
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| Protein accession | YP_003266234 |
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| Protein GI | 262195025 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00186852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.607723 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTTC AGTCGCTGCA GAAGGCGGTG CGCCGCGCGT CGACCACCCA GGTCTGGTCT
CAGGGCGTCC GGCTGTCGCG CGAGGACGCG GTCACCGGGG AGAGCGCCGA CCCGGACGAG
GTCGTGCTGC GGGTCAAGGC GCCCGGGCGC GCGGTGGCGC CGACCGTGGT GCTGTACCTC
GAGGACCTCG AGTGGGAGTG CGATTGCCCC AACAGTGAGG ACACCTGCGC GCACGTGGTC
GCGGCCGTGC TGGCGCTGGT CCAGGCGCGT CAACAGGGCC ACGAGCTGCC GCAATCGCAG
AGCGCGGGCG GCAAGGTGCG CTATCACTTT CGCCGCGAGG GCGGCGGGCT GGCGCTCGAC
CGCGTCATCG TCGCGGCCGA CGGCGCCGAG CACCCCATCC CGCAGACCCT GTCGGCGCTG
ATCTCGGGGC GCACGCCCGG ACCCTCGGTG GCGCCCGAGC AGTCCGACCT GAGCGTCGAC
CAGCTTCTGG GCACGCGCGT GCGCGGTCGC CTGCCGGCCG ATCGCGTCAT CCATCTGCTC
ACCGCGCTGG CCGGTCACGG CGAGATCGTG CTCGACGGCG AGCCCGTGAG CATCTCCGAC
GAGGTGCTGG TGCCGCGCGC CGTCGTCGAG GACAGCAAGG GCGGCGCGCG CCTCACCATC
GCCCGCGATC CCCGCATCGA CGAGGTCGTG ACCCTGGGCG TGGCGCGCTG CGCCCAGGTG
CTCCATCGCC TGGGCGAGAC CGAGCTGTCG GGGCAGCGCC TCGAGCATCT GCCGCGGGTG
GAGGAGGTGC CGCGCACCGA GCTGCACACC CTGCTCGAGC AGACCGTGCC CGCGCTTGAG
CGGCGCATCC CGGTCGAGGT CAGGACCCGG CGCGCGCCCG AGGTGGCCCG GGACGCGCGT
CCGGATATCC GCCTCGACGT GCGCCAGGAG GGCCACCGCC TGGCCGTGCT GCCGACCTTG
GTGTACGTCG AGCGCAACGG CGACGAGCCC ATCGCGCGCA TCGACGGCGG CCGCCTGGTG
CACCTGCGCG GCCCGGTGCC CGTGCGCGAC GAAGCCGGCG AGAAATACCT GCTGCAGCGG
CTGCGCGACC AGCTCAACAT GATGCCCGGG CGGCGCGTGG AGTTCGAGGG CCGCGACGCG
GTGAGCTTTC AGAAGAAGCT CGCCGACTGG AGCGGGCGGC TCACGGGCGA TGTCGAGCGC
GAGCGGTTTT TGGACGCCCC GCCCATCATC CCGCGGCTGC AGCTCGACGG CGCCGCGGCC
GATATCTATT TCGAGGCGCC GGCGGGCGAG GGCGGCGCGG GCGGCGAGGG CGACGCGCAG
CGGATCGATG CCGCGACCGT GATGCGCGCG TGGCGCCAGG GCGATGGCTT CGTGGCCCTG
CCCGCGGGCG GCTGGGCGCC GCTGCCGCAG GCGTGGCTGC GCGATCACGG CCACCTGGTG
CTCGACCTGC TGGCCGCGCG CGATGAGCGC GACCAGGTGC CGCCCTTCGC GCTGCCCGAT
CTCGCGCGCC TGTGCGCGCT GCTCGAGCAC CCGCCGCCGC CCGGACTCGA CGCCCTGGCG
CCGCTGTTCG AGCAGTTCAC CGAGCTGCCG CCGGCGCCGC TCCCGGACGA CCTGCGCGCC
GAGCTGCGCG GCTATCAGCA CACCGGCGTG CGCTGGCTCA GCTTTTTGCG CGACGCCGGT
CTGGGCGCGG TGCTGGCCGA CGACATGGGT CTGGGCAAAA CCCTGCAGAC CCTGTGCGCG
CTGCGCGGGC GGAGTTTGGT CGTGTGTCCG ACAAGCGTGG TGCACAACTG GGCCGACGAG
CTGCGGCGTT TTCGACCGGC CCTGCGCGTG GCCCTGTACC ACGGCCCGCG CCGCGAGCTC
GATCCCGAGG CCGACGTGGT GCTCACCAGC TACGCGCTGC TGCGCCTCGA CATCGAGCAG
CTCTCGGCCA TCGCCTGGGA CGCCGTGGTG CTCGACGAAG CCCAGGCCAT CAAAAACCCC
GAGAGCCAGG TCGCGCGCGC GGCCTTTCGC CTCGACGCCG GCTTCCGCGT GGCGCTCAGC
GGTACCCCGG TCGAAAACCG GCTCGACGAG CTGTGGAGCC TGTTCCACTT CGTCAACCGC
GGTCTGCTCG GCGGCCGCAA GAGCTTCAAA GAGCGCTACG CCGACCCCGT GGCCCGCGGC
GAGGACGGCG CCGCCGAGCA GCTTCGCGCG CGCATCCGCC CGTTTCTGCT GCGCCGGCGC
AAACGCGAAG TCGCGCCCGA GCTGCCGCCG CGCACCGAGG CGGTGTTGCA CTGCGAGCTG
TCCGATTCCG AGCGCGCGGC CTACGACGCG GTGCGCGCGG CCACCCAACG CGACGTGCTC
GAGCGCCTGG CCCACGGCGG CGGCGTGATG GAGGCGCTCG AGGCGCTGCT GCGTCTGCGC
CAGGCCGCGT GTCACCCCGC GCTCCTGCCC GGACGCGAGG CCGATACCTC GGCCAAGATG
GAGATGCTGG TCGACGCCCT GAGCGTGGTC GCGGCCGAGG GCGGCAAAGC GCTGGTGTTC
TCGCAATGGA CAGGTCTGCT CGATCTCATC GAGCCACACC TGCGCGCGGC CGAGATATCG
TTCAATCGTC TCGACGGCAG CACCCGCGAT CGCGGCGGCG TGGTCGCCGC GTTTCAGGAC
GAGAGCGGTC CCACGGTGAT GCTCATCTCG CTCAAAGCCG GCGGCACCGG ACTCAATCTC
ACCGCGGCCG ATCATGTCTT TTTGTGCGAC CCGTGGTGGA ATCCGGCAGT CGAGGAGCAA
GCGGCCGATC GCGCCCATCG CATCGGACAG GATCGTCCGG TCATGGTGTA TCGACTGGTG
AGCAAGGATA CTGTCGAAGA GCGCATACTA GCCCTGCAAG AGCAGAAGCG CGCCTTGGCC
GAAGCCGCGA TCGGCGAGGG CGCGCGCGCC GCGCAGCTCA CGCGCGACGA TCTCATGGCG
CTGCTCGCGG CCGGTTGA
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| Protein sequence | MDLQSLQKAV RRASTTQVWS QGVRLSREDA VTGESADPDE VVLRVKAPGR AVAPTVVLYL
EDLEWECDCP NSEDTCAHVV AAVLALVQAR QQGHELPQSQ SAGGKVRYHF RREGGGLALD
RVIVAADGAE HPIPQTLSAL ISGRTPGPSV APEQSDLSVD QLLGTRVRGR LPADRVIHLL
TALAGHGEIV LDGEPVSISD EVLVPRAVVE DSKGGARLTI ARDPRIDEVV TLGVARCAQV
LHRLGETELS GQRLEHLPRV EEVPRTELHT LLEQTVPALE RRIPVEVRTR RAPEVARDAR
PDIRLDVRQE GHRLAVLPTL VYVERNGDEP IARIDGGRLV HLRGPVPVRD EAGEKYLLQR
LRDQLNMMPG RRVEFEGRDA VSFQKKLADW SGRLTGDVER ERFLDAPPII PRLQLDGAAA
DIYFEAPAGE GGAGGEGDAQ RIDAATVMRA WRQGDGFVAL PAGGWAPLPQ AWLRDHGHLV
LDLLAARDER DQVPPFALPD LARLCALLEH PPPPGLDALA PLFEQFTELP PAPLPDDLRA
ELRGYQHTGV RWLSFLRDAG LGAVLADDMG LGKTLQTLCA LRGRSLVVCP TSVVHNWADE
LRRFRPALRV ALYHGPRREL DPEADVVLTS YALLRLDIEQ LSAIAWDAVV LDEAQAIKNP
ESQVARAAFR LDAGFRVALS GTPVENRLDE LWSLFHFVNR GLLGGRKSFK ERYADPVARG
EDGAAEQLRA RIRPFLLRRR KREVAPELPP RTEAVLHCEL SDSERAAYDA VRAATQRDVL
ERLAHGGGVM EALEALLRLR QAACHPALLP GREADTSAKM EMLVDALSVV AAEGGKALVF
SQWTGLLDLI EPHLRAAEIS FNRLDGSTRD RGGVVAAFQD ESGPTVMLIS LKAGGTGLNL
TAADHVFLCD PWWNPAVEEQ AADRAHRIGQ DRPVMVYRLV SKDTVEERIL ALQEQKRALA
EAAIGEGARA AQLTRDDLMA LLAAG
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