Gene Hoch_1786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1786 
Symbol 
ID8544168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2470199 
End bp2471392 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content72% 
IMG OID646386493 
Productaspartate kinase 
Protein accessionYP_003266228 
Protein GI262195019 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0527] Aspartokinases 
TIGRFAM ID[TIGR00657] aspartate kinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00455709 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.595189 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGCAGC CCATCGTGGT TCAGAAATAC GGCGGCTCCT CGGTCGCCGA CGTCGACAAG 
ATCAAACGGG TCGCCGACCG CGTGGTCGCC ACCCGCAAAC AAGGTAACCA GGTCGTGGTC
GTGGTCTCGG CCATGGGCAA GACCACCGAC CAGCTCCTGT CTCGCGCCCA CGAGATCTCG
CCCTCGCCCT CGCGACGCGA GCTCGACATG CTGCTCACCT GCGGCGAGCG CATGTCCATG
GCGCTCTTGT CCATGGCCAT CCACGAGCTC GGCGAGGAGG CGGTCTCGCT CACCGGTTCG
CAGTGCGGCA TCATCACCAA CGACCGCCAC TCGGGCGCGC GCATCATCGA GGTGCGGCCC
ATCCGCGTGC AGGACGAGCT CGAACGCGGC CGCATCGTGG TCGTCGCCGG CTTCCAGGGC
GTGTCCTACC GGCGCGAGGT GACCACGCTC GGCCGCGGCG GCTCGGACAC CACCGCCGTG
GCCCTGGCCG CCGCGCTGAG CGCCGAGTAC TGCGAGATCT GCTCGGACGT CGAGGGCGTC
TACACCACCG ATCCGCGGGT GGTCAGCGGC GCCCAGATGC TCGACGCCAT CTCCTGCGAC
CAGATGCTCG AGCTGGCCGC GCACGGCGCC AAAGTGCTGC ACCCGGGCTG CGTCGAGATC
GCGCGGCGCA CCGGCGTGGC CCTGTACGCG CGCTCGACCG CGCTCATGGG CGGCGGCACC
CGCATCGACC TGGTGGGCGC GGGCGCCGAC GTCGACGCCG TGGGCGTGAG CGGCCAGACC
CGGCTGGTGC GCGTGCGCGC CGAGGGCGAA GCCTGCGTCG ACCGCGTGCT CGCGGCCGCC
GCCGAGGCGC GCGTGCCCGC CCTGCACCTC GACACCGACA TGGACTCGGC CGACCTGTGG
TTCTCGCTCG CCGACGTGCC CGACTGGAGC GTCATCAAGC AGCGCTTCGC CAGCGAGCTG
TCGCTCGAGG TGTTCGAGGG CGTGGGCGCG GTGAGCGTCA TCGGCGACGG CATCGGCAGC
GACCCGTCCA AGCTCGAGCG CGCCCGCCGC GTGGCCCGCG AGGCCGAGAT CGCCATCGTC
GCCATGAGCA CCTCGCCGCT GCGCGTGAGC CTGTTCTGCG CCGAGCCCGA GGTCGACGCG
CTGGTGCGCG CGCTGCATCA CGAGTACATC GAAAAGCCCC GCCAGGGCCT GTGA
 
Protein sequence
MQQPIVVQKY GGSSVADVDK IKRVADRVVA TRKQGNQVVV VVSAMGKTTD QLLSRAHEIS 
PSPSRRELDM LLTCGERMSM ALLSMAIHEL GEEAVSLTGS QCGIITNDRH SGARIIEVRP
IRVQDELERG RIVVVAGFQG VSYRREVTTL GRGGSDTTAV ALAAALSAEY CEICSDVEGV
YTTDPRVVSG AQMLDAISCD QMLELAAHGA KVLHPGCVEI ARRTGVALYA RSTALMGGGT
RIDLVGAGAD VDAVGVSGQT RLVRVRAEGE ACVDRVLAAA AEARVPALHL DTDMDSADLW
FSLADVPDWS VIKQRFASEL SLEVFEGVGA VSVIGDGIGS DPSKLERARR VAREAEIAIV
AMSTSPLRVS LFCAEPEVDA LVRALHHEYI EKPRQGL