Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_1785 |
Symbol | |
ID | 8544167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 2468834 |
End bp | 2470126 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 646386492 |
Product | hypothetical protein |
Protein accession | YP_003266227 |
Protein GI | 262195018 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00200969 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.820743 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCCGCCCG ATGCGCCGCT GCCGCCCGAC GCGGCGCCGC GGCCACCGCC CACGCCCGTG GTCGGCGTGT TCGACTGTCA GGCGGCCGCG CTCGCGGGCG GCGACGGCGT GGCCACGCGC AGCACCGCGG TGCCGCCCGA TGGCGTGAGC CTGCCCGAGC ATCCCGACAA CCCGGTGTTC GCGTGGACCG GCCTGGCCGA GCGCGAGGGC GTGCTGTACG CGTCGAGCAA CGACGAGATC CGCCGCGTGG TGCAGGCCGA GGACGGCGCG ACCTTGCACA AGGTGGCCGG GGCCAGTCAG TCGGCCGCGG GCACCACGGA GTTTCGCGGC AACGTCGCCT GCGGCGATGC CCGGCTGCGC AGTCTGGGCG ATCTGGCCGT GCTGCCCGAC GGCAGTTTGG TCGCGGTGGA CGAAATCTCC AACGCGGTGC TGCGCGTGAG CGCGCCCGAC GATGCCGAGA CGTGCTTCGT GCACTACGTC TCCGGTACCA GCGACGAGAT GGCGCAGCGG CCGGGCGAGA ACCAGCCGCC CGAGACCGTG CCCGCCAACG GCCCGCTGGT GGCCAAGTCC TATCCCAACA GCGGCAACGC CGACGGCGAC CACCGCGGCG CCCGCCACTA CAAGCCGCTC TTGCCGGCCG CGCTCGACGG CGATATCTAC GTGCTCGAGA GCGACATCGA GGACGCGCGC GGGCGCCTGC TGCGACGCAT CGTGCTCGAC CCCGAGACCG GGCGCGCGCA GGGCGTGAGC ACGGTGGCGC GCCTGAGCGA TGTCGACACC GCGTACGGTT TAGTGGCTCA GGACAACCGC CTGTACCTGC TGGTGGTCGA GGGCAGCAAC GGCGCCGAGG GCGTGATCTA CGAGGTCGAT GTGGCCGCCT CCGCCGGCAA CAATCTGCGC GAGGTGGTGC GCGCCGGCAA GGAGGCCTGG CGCGCCGACA GCAGCCAGGC CATCCGGCTC TCGGGGCTGG CCGCCTGCGA CGGCTATCTG TGCGTCACCG GCAGCTTCTA CGTGTGGCGC GTGCACCCGC AGACCGGGGC CATCGAGGTC ATAGCCGGCC TCGGCAACCC GGGCGTGCGC TCGTCGTTCA GCGAATTCGA GGCCGGCTAC GAGCACCTGG GCGAGCGCGC GCCCACCGAG ATGGCGCTGC CCATGGCGGT GTCGCGCGCG ACCATCCGCG GCTTCCTGGC CTCGCTGGTG TACGAGCCCG GCCGCGACGC GCTGTGGTAC GCGGGCGAGA CCACGCAGTC AGCGTATCTC GTCCGTCTGT CCGACTGTAC CACGCACGAG TAG
|
Protein sequence | MPPDAPLPPD AAPRPPPTPV VGVFDCQAAA LAGGDGVATR STAVPPDGVS LPEHPDNPVF AWTGLAEREG VLYASSNDEI RRVVQAEDGA TLHKVAGASQ SAAGTTEFRG NVACGDARLR SLGDLAVLPD GSLVAVDEIS NAVLRVSAPD DAETCFVHYV SGTSDEMAQR PGENQPPETV PANGPLVAKS YPNSGNADGD HRGARHYKPL LPAALDGDIY VLESDIEDAR GRLLRRIVLD PETGRAQGVS TVARLSDVDT AYGLVAQDNR LYLLVVEGSN GAEGVIYEVD VAASAGNNLR EVVRAGKEAW RADSSQAIRL SGLAACDGYL CVTGSFYVWR VHPQTGAIEV IAGLGNPGVR SSFSEFEAGY EHLGERAPTE MALPMAVSRA TIRGFLASLV YEPGRDALWY AGETTQSAYL VRLSDCTTHE
|
| |