Gene Hoch_1785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1785 
Symbol 
ID8544167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2468834 
End bp2470126 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content72% 
IMG OID646386492 
Producthypothetical protein 
Protein accessionYP_003266227 
Protein GI262195018 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00200969 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.820743 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGCCCG ATGCGCCGCT GCCGCCCGAC GCGGCGCCGC GGCCACCGCC CACGCCCGTG 
GTCGGCGTGT TCGACTGTCA GGCGGCCGCG CTCGCGGGCG GCGACGGCGT GGCCACGCGC
AGCACCGCGG TGCCGCCCGA TGGCGTGAGC CTGCCCGAGC ATCCCGACAA CCCGGTGTTC
GCGTGGACCG GCCTGGCCGA GCGCGAGGGC GTGCTGTACG CGTCGAGCAA CGACGAGATC
CGCCGCGTGG TGCAGGCCGA GGACGGCGCG ACCTTGCACA AGGTGGCCGG GGCCAGTCAG
TCGGCCGCGG GCACCACGGA GTTTCGCGGC AACGTCGCCT GCGGCGATGC CCGGCTGCGC
AGTCTGGGCG ATCTGGCCGT GCTGCCCGAC GGCAGTTTGG TCGCGGTGGA CGAAATCTCC
AACGCGGTGC TGCGCGTGAG CGCGCCCGAC GATGCCGAGA CGTGCTTCGT GCACTACGTC
TCCGGTACCA GCGACGAGAT GGCGCAGCGG CCGGGCGAGA ACCAGCCGCC CGAGACCGTG
CCCGCCAACG GCCCGCTGGT GGCCAAGTCC TATCCCAACA GCGGCAACGC CGACGGCGAC
CACCGCGGCG CCCGCCACTA CAAGCCGCTC TTGCCGGCCG CGCTCGACGG CGATATCTAC
GTGCTCGAGA GCGACATCGA GGACGCGCGC GGGCGCCTGC TGCGACGCAT CGTGCTCGAC
CCCGAGACCG GGCGCGCGCA GGGCGTGAGC ACGGTGGCGC GCCTGAGCGA TGTCGACACC
GCGTACGGTT TAGTGGCTCA GGACAACCGC CTGTACCTGC TGGTGGTCGA GGGCAGCAAC
GGCGCCGAGG GCGTGATCTA CGAGGTCGAT GTGGCCGCCT CCGCCGGCAA CAATCTGCGC
GAGGTGGTGC GCGCCGGCAA GGAGGCCTGG CGCGCCGACA GCAGCCAGGC CATCCGGCTC
TCGGGGCTGG CCGCCTGCGA CGGCTATCTG TGCGTCACCG GCAGCTTCTA CGTGTGGCGC
GTGCACCCGC AGACCGGGGC CATCGAGGTC ATAGCCGGCC TCGGCAACCC GGGCGTGCGC
TCGTCGTTCA GCGAATTCGA GGCCGGCTAC GAGCACCTGG GCGAGCGCGC GCCCACCGAG
ATGGCGCTGC CCATGGCGGT GTCGCGCGCG ACCATCCGCG GCTTCCTGGC CTCGCTGGTG
TACGAGCCCG GCCGCGACGC GCTGTGGTAC GCGGGCGAGA CCACGCAGTC AGCGTATCTC
GTCCGTCTGT CCGACTGTAC CACGCACGAG TAG
 
Protein sequence
MPPDAPLPPD AAPRPPPTPV VGVFDCQAAA LAGGDGVATR STAVPPDGVS LPEHPDNPVF 
AWTGLAEREG VLYASSNDEI RRVVQAEDGA TLHKVAGASQ SAAGTTEFRG NVACGDARLR
SLGDLAVLPD GSLVAVDEIS NAVLRVSAPD DAETCFVHYV SGTSDEMAQR PGENQPPETV
PANGPLVAKS YPNSGNADGD HRGARHYKPL LPAALDGDIY VLESDIEDAR GRLLRRIVLD
PETGRAQGVS TVARLSDVDT AYGLVAQDNR LYLLVVEGSN GAEGVIYEVD VAASAGNNLR
EVVRAGKEAW RADSSQAIRL SGLAACDGYL CVTGSFYVWR VHPQTGAIEV IAGLGNPGVR
SSFSEFEAGY EHLGERAPTE MALPMAVSRA TIRGFLASLV YEPGRDALWY AGETTQSAYL
VRLSDCTTHE