Gene Hoch_1783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1783 
Symbol 
ID8544165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2463087 
End bp2464430 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content77% 
IMG OID646386490 
Producthypothetical protein 
Protein accessionYP_003266225 
Protein GI262195016 
COG category[R] General function prediction only 
COG ID[COG3950] Predicted ATP-binding protein involved in virulence 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.599015 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATCG AGGTCGAGAA CCTGCGGGGT TTCCGCCGGG CGGCGCTGTC GTTCGCGGCC 
GCGCCGGAGC CGGACGCCGG CGCGCGCCCG CTCACCGTGC TGCTCGGCGG CGCGGGCAGC
GGCAAGAGCA CGCTGCTGCA GGCGCTGGCG CTGGGGCTTA TGCCGCGGCG CGAGGCCGCC
GCCCTGCTCG CCCACCAGCC CGGGCCCTGG GTCCGGCTGG GAGCGCGCGC GCGCGGCGCC
CAGTCCCACC CCGAGGCGCG CATCCGGGTC GAGCTGGCCG ATCCCGCGCA GCCGCAGCGG
CGCTTCTCCG TGACCACGCA TATCGCAGAT AGCGACGGCG ACGCGGGCAG CGCGACGACC
GCGGGCGGGC CGGCTGCTGG GCCGACGCTG CGCCAGGAGA CCGAGCCGCG CACCGGCTTT
CCCTGGCACC GCGTGCGCGT GAGCGGCTAC GGGGCCGTGC GCGTGCCGCC GGCTCCGGCC
CAGACGACGA ACGCGCGCGG CCGCGCCTCT GCTGCCAAGC CGCCGCGGGC GCGCGCCCGC
GACGCCGTGG CCACGCTCTT CGACCCGCGC GCCCGGCTGC TGCCGGCGAG CGCGCTGTTC
GCCGATGCCG CCGCCGACGC CGCGGCCCAG CGACTCCGTC TCTGTAAATC GATCTTGGGA
ATCCGCGGCT CGCTGAATGG CAATGATCTC GGTCTGGTGC AGAAACGCGC GTCCGGTTCG
ATACCGCTCA GTGCTCTGGG CGGTGGCGTG AGCGACATCG CCGCCTGGCT GGTCGATCTC
GTGGCCCGCG CGCACGCCGG AGCGCCGCGC GGCCTGCTGC TGGTCGACGC GGTGGACGCC
CAGCTTCAGC CCGCCGGGCA ACGCGACCTG CTCGCGCGCG TGCGCGCACG CTGCCCGGAG
TTGCAGGTCG TGGTCAGCGC GCGCTCGCCC GGCGCCATCG CCAACCGCGC AGCGGCCGAG
CTGGCGCTGT GCACGCGCCG CGGCCAGCAG CTCGCGGTGT CGCAGGATCT GCCGCCGCCC
GCCGGCCACG ACGCCGACGC CCTGCTGCGC GGGCCCTGGT TCGGCCTGCC GGCGACCACC
GACGACGCCA CCGCCGTCCG CCTGTCCGAT TATCGCGAGG GCGTGCGCGC GGGCGCAGCC
GCAGACGATC GCGCCCGCCT GCGCGAGGCC GTGCGCGCCC GCGTCGGCTA TTTCGTGGCC
ACCCCGCTCG ACGAGCTGGC CGGCGAGGTG CTGGCCGCGT TCGAGGCCGA GCACACCGCG
GCCGAAAGCG AGGATGAGCG GGCCCGCATC CGCGAGCGCG CGGCCGAGGC GCTAAGGCGC
CGATTGGGGG ACGCCGAGAC ATGA
 
Protein sequence
MQIEVENLRG FRRAALSFAA APEPDAGARP LTVLLGGAGS GKSTLLQALA LGLMPRREAA 
ALLAHQPGPW VRLGARARGA QSHPEARIRV ELADPAQPQR RFSVTTHIAD SDGDAGSATT
AGGPAAGPTL RQETEPRTGF PWHRVRVSGY GAVRVPPAPA QTTNARGRAS AAKPPRARAR
DAVATLFDPR ARLLPASALF ADAAADAAAQ RLRLCKSILG IRGSLNGNDL GLVQKRASGS
IPLSALGGGV SDIAAWLVDL VARAHAGAPR GLLLVDAVDA QLQPAGQRDL LARVRARCPE
LQVVVSARSP GAIANRAAAE LALCTRRGQQ LAVSQDLPPP AGHDADALLR GPWFGLPATT
DDATAVRLSD YREGVRAGAA ADDRARLREA VRARVGYFVA TPLDELAGEV LAAFEAEHTA
AESEDERARI RERAAEALRR RLGDAET