Gene Hoch_1782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1782 
Symbol 
ID8544164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2462329 
End bp2463090 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content72% 
IMG OID646386489 
Producthypothetical protein 
Protein accessionYP_003266224 
Protein GI262195015 
COG category 
COG ID 
TIGRFAM ID[TIGR02646] conserved hypothetical protein TIGR02646 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.716068 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATC TGCGCGGTCG TCGCCCCGAG ACGCCGCCCG GATTCGATCA CAGCCCCGAC 
ATCGCCCGCG CACGCGCCCG GATCCAGGCC CGCGCCGCAG CCGGCAAGCT GCTGCGCGCG
AGCGACTTTC CGGCGCTGTG GCTGGCGCAC AAGGATGTGT TCGCCGCGGC GCAACGCGAC
AAGTGCGCCT ACTGCGAGAC CGAGAGCGCG GCCGCCCAGT TCGGCACCAT CGACCACTAC
CGACCCAAGA CCAGCATCGT CGACCGAGCG TCCGGCAACC GCGGCAGGCG TCGCCGTCCG
GGCTACTACT GGCTGGCCTA CGACTGGCAA AACTGGCTGT ACGTGTGCCA GGTGTGCAAT
CACGCCAAGG GCGAGCAGTT CCCGCTACGC CGGCGGCGAC GCGTGCGCCC GGGCGCCGAG
CGCGACGAGC GGCCGCTGCT GCTCAACCCC TACGACACCG ACCCCGCGCC GCATCTGCGC
TTCGACGCGC GCGGCGGTGT CCGCGGCCTC ACGCCCGAGG GCCGGCGCAC GATCGAGGTC
TGCCGCCTCG AGCGCATACA CCTGGTGCGC AAACGCGAGC GCAGCGCGCG CGCGCTGCGG
ACCATGTTCG ACACCTACCA CCTGGTCGCG CGCGCCCGGC CCGGGAGCGC CGCGGAGTTT
CTCGAGCTGC TCACCCGCAG CACGCGCGCC GACGCCGAGT ACGCGGGCAT GGCCCGCGAC
CTGCTGGGCC AGTGGCTCAG CGCAGGCGCT CAGCGCAGGT AA
 
Protein sequence
MIDLRGRRPE TPPGFDHSPD IARARARIQA RAAAGKLLRA SDFPALWLAH KDVFAAAQRD 
KCAYCETESA AAQFGTIDHY RPKTSIVDRA SGNRGRRRRP GYYWLAYDWQ NWLYVCQVCN
HAKGEQFPLR RRRRVRPGAE RDERPLLLNP YDTDPAPHLR FDARGGVRGL TPEGRRTIEV
CRLERIHLVR KRERSARALR TMFDTYHLVA RARPGSAAEF LELLTRSTRA DAEYAGMARD
LLGQWLSAGA QRR