Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_1776 |
Symbol | |
ID | 8544158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 2454306 |
End bp | 2455025 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 646386483 |
Product | competence protein F, putative |
Protein accession | YP_003266218 |
Protein GI | 262195009 |
COG category | [R] General function prediction only |
COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
TIGRFAM ID | [TIGR00201] comF family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.280067 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGCCG CCGTCTTCGA TCTACTCTTC GCCCCCGGCT GCGCGGCCTG CGACCAGCCG CTGACGGGCG CCGGGGCGCG GGCGCTGCCT CTGTGCGCGG TGTGCGCGAT CTCGCTGTAT CCGCTGGACA GCGCGTGTCC GCGCTGCGCC GAGCCGCTCG AGGGCCCCGT GAACCTGCTG TGCCGCCGCT GCCGCACCCG GCCGCCGCCG TTCGCGTCGG CGCACGCGCC CTATCGCTAC GGCGGCGAGC TGGCGCGCGC CTTGCGCCGG CTCAAGTACC AGCGCCGCGC CGATATCGCC CGCGCGCTGG CGCCGCTGCT GGCGCCGCGG CTGCGCGAGG TGGTGGCGCG CTGCGAGATC GAGGTGGCCG TCCCCGTGCC CCTGCACTGG CGACGCGCGA GCCAGCGCGG CTTCAACCAG GCGGCGCTGC TCTTGCGCCA GGCGGCGCGC GGCTCGCGGC TGCCCATCGA TGCGCTGAGT CTGCGCCGGC AGCGGGCGAC GGTCACCCAG CGTCATCTGC GCGGCGGTGA GCGCGAGGCC AACGTGCGCG GCGCCTTTGC CGTGGTCGCG CGGCGGCAGC GGCACATCGC CGGGCGCCGC GTGCTGTGCG TGGACGACAT CATGACCACG GGCGCGACCA TGGCGGCGGC CGCGCGCGCG TTGCGGGCTG CGGGGGCGCG CGAGGTGGTC GCCTTCTGCG CGGCGCGGGC CGAGCGATGA
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Protein sequence | MLAAVFDLLF APGCAACDQP LTGAGARALP LCAVCAISLY PLDSACPRCA EPLEGPVNLL CRRCRTRPPP FASAHAPYRY GGELARALRR LKYQRRADIA RALAPLLAPR LREVVARCEI EVAVPVPLHW RRASQRGFNQ AALLLRQAAR GSRLPIDALS LRRQRATVTQ RHLRGGEREA NVRGAFAVVA RRQRHIAGRR VLCVDDIMTT GATMAAAARA LRAAGAREVV AFCAARAER
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