Gene Hoch_1757 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1757 
Symbol 
ID8544139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2428042 
End bp2429184 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content69% 
IMG OID646386464 
Producthypothetical protein 
Protein accessionYP_003266199 
Protein GI262194990 
COG category[S] Function unknown 
COG ID[COG3146] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.857933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00701544 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAGCAG CTCTCCCCAT CGAGTTCGAA CTTCGCGACA GCCTGTCCCT CGGCGAGCAG 
CACGCGCTGT CCGAAATCCT GCGCGGCACC CGCTTCGGCG CGCTGGCCAT CGCCTGGTCG
GAGTTGGTGC GCAGCGCCCA TCCCCAGCAG ATGTCGCTGT ACTACGTGCC CGTGCGCCTG
CGCGACCAGC TCATCGGCGT GGCCATCGTC TACGTGGTGC ACCGCTTTGA TATCGGCAAA
TTCGCGGGCG GAGCGCTGGC CGCTATCAGC GCGCGGCTGG CGCGCTGGCG CCTGCACCCG
CTGAGCCTGC GCCTGGGCTT CGTCGAGATC CCGCTGATGA ATCAGCCCGG TCTGCTGCTC
GCCGCCGAGC ATGCGTCCGC GTTCGACGCG ATCGCGGCGC AGCTCGTCCA GTGGCTCCAG
GGCGCGCTCG ACATCTCGGG GCTGTGCTTC AAGACCAGCC CCGAGCGCGT GGGTCCGGCG
TCCGCGGCGC TGGGCGCGCT GCGCATCCCG GCGCCGCGTG ACGCGCTGCT CACGCCCCGG
GCCGCAAGCT TCCGCGCCTA CCTGAGCTCC TTCGGCCGCA ACCGCCGCCG CAGCGCCGAG
AAATCCCGCC GCCGCCTCGA GCGCTACGGC GCCACGATCG AGCGCCTGCG GCCCGGTGAA
GAGCCGGGCG ACCGACTCTT CGCGCTGTTC TCGGCCACCG CCGAGCAGGC CGCGCGCACC
GGCAAGCTGC CGACCACGAT CGCCATCGAG GCGCCCTTCT TCCACCGCCT GCACACGCTC
GGCAGCGACG CCTACCACGT CGACGCGGTC TGTTATCGAG GCGAGATCAT CGCCTTCCTG
CTCGCGCTCC ACGACGGCGA CACGCGCTAC GTCAAGTACT ACGGCGGCGA CTACGAGCAC
GCGGTCAGTA CGCAAGCGTA TTTCAACCTC ATCGCCCACG AGTTCGAGGA CGCCATGGAC
GCCGGCTGCA AAACCATCGA CTGCGGCGTC TCGAACTACG AATACAAAGA GAAGCTCGGC
TGCACCCTGC ACCCGAGCGA GTACCTGGCC GCGCTCTATC ATCCCCTGCT GCGACCGCTG
GCGCAGCTCG TCGGCAAGCG CATGGCTCGA AGCGAGAGCC CGGCGGCCGA CGACGCGCCC
TGA
 
Protein sequence
MEAALPIEFE LRDSLSLGEQ HALSEILRGT RFGALAIAWS ELVRSAHPQQ MSLYYVPVRL 
RDQLIGVAIV YVVHRFDIGK FAGGALAAIS ARLARWRLHP LSLRLGFVEI PLMNQPGLLL
AAEHASAFDA IAAQLVQWLQ GALDISGLCF KTSPERVGPA SAALGALRIP APRDALLTPR
AASFRAYLSS FGRNRRRSAE KSRRRLERYG ATIERLRPGE EPGDRLFALF SATAEQAART
GKLPTTIAIE APFFHRLHTL GSDAYHVDAV CYRGEIIAFL LALHDGDTRY VKYYGGDYEH
AVSTQAYFNL IAHEFEDAMD AGCKTIDCGV SNYEYKEKLG CTLHPSEYLA ALYHPLLRPL
AQLVGKRMAR SESPAADDAP