Gene Hoch_1753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1753 
Symbol 
ID8544135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2419443 
End bp2420813 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content70% 
IMG OID646386460 
ProductFHA domain containing protein 
Protein accessionYP_003266195 
Protein GI262194986 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00138455 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACGGCGC GCGACAATCC CGGACATGGT GGTGAGCGGG GACGGGGCAA GGGGCCCGAT 
CTAACCCTCA CGGTCGGGGC AGGTGGGCCC GCGATCGACG CCGAGGTGCT GCGCAGCTTC
GAGCTCGAGA TCATCGAAGG CGCGGACACC GGCAGGCGCT GGCGCTCGCA GGGCCGGACC
TGCTCGATCG GCAGCGCCGA GGGCTGCGAT CTGGTGCTGC GCGACCCCAC GGTGAGCCGC
TTGCACTGCG AGCTGAGCGT GGACGACGAG CGCGTGCGCA TCCGCGACAC CGGCAGCCGC
AACGGCACCC TGGTGGACGG CGTGCGCGTG GTCGACGCGT TTTTGCGCGG CGGCAGCGTG
CTGCGGCTGG GCCGCCTGGC GCTCAAGTTC GACTACGGCA TCGAGTCCAA CGCGCTGCGC
GTGTCCTCGC GTAAGCAGTT CGGCATCCTG CGCGGCGACT CGCTGCCCAT GCGCCAGGTG
TTCGCCATTC TCGAGCGCGC GGCGGCCTCG CAGGCCACGA CCCTGATCGA GGGCGAGACC
GGCACCGGCA AGTCCGCGGC CGCGCGCTCC ATCCACATGG AGAGCGAGCG CCGCGACGGG
CCCTTCGTGA TCCTCGACTG CGGCGCGGTG CCGGCCAATC TGCTCGAGAG CGAGCTTTTC
GGTCACGAGC GCGGGGCCTT TACCGGCGCC GATACGCGCC GCGTGGGCGC CTTCGAGGAG
GCCTCGGGCG GCACCTTGTT CCTCGATGAA ATCGGCGAGC TGCCCCTGGA TTTGCAGCCC
AAGCTGCTCG GCGTGCTGGA GAACCGCGAG GTGCGTCGCC TGGGCAGCAA TAAGGTGGTT
CCGGTGGACG TGCGCGTCAT CGCGGCGACC AATCGCGACC TGTGCGCGGC GGTCAACGAC
GGCAGCTTTC GCTCGGATCT GTACTTTCGC GTCGCCGTCA TCCGTCTGCA GATTCCGCCG
CTGCGCGCGC GTCGCGGCGA GATCCTGCCC ATCGCGCGCA AGCTGCTGGC CGATCTTGGC
CTCGACGAGG CCGCGATCGA GCGCTTTCTG TCGCCCGCGC TCATCACCCA GCTTCAGCGC
AGCAACTGGC CCGGCAACGT GCGCGAATTG AAGAACTACC TCGAGCGCTG CCACGTGTTC
GAGGAGGCGC TGCCGGTCGA CACCATGGCG CCGCGCGGCG AGGTCGGCGC GGTCGATACC
TCGCTGCCCT TTGCCGACGC GCGCCAGCGC TTGCTCAATC ACTTCGAGCG CGACTATCTG
AGCTCGATCC TGGCCGAGCA CGAGGGCAAA GTGGTGGACG CGGCCGCGGC CGCGGCCGTG
GACCGCACGC ATTTCTACCG CCTGCTGCGC AAGCACGGGC TCAATCGCTG A
 
Protein sequence
MTARDNPGHG GERGRGKGPD LTLTVGAGGP AIDAEVLRSF ELEIIEGADT GRRWRSQGRT 
CSIGSAEGCD LVLRDPTVSR LHCELSVDDE RVRIRDTGSR NGTLVDGVRV VDAFLRGGSV
LRLGRLALKF DYGIESNALR VSSRKQFGIL RGDSLPMRQV FAILERAAAS QATTLIEGET
GTGKSAAARS IHMESERRDG PFVILDCGAV PANLLESELF GHERGAFTGA DTRRVGAFEE
ASGGTLFLDE IGELPLDLQP KLLGVLENRE VRRLGSNKVV PVDVRVIAAT NRDLCAAVND
GSFRSDLYFR VAVIRLQIPP LRARRGEILP IARKLLADLG LDEAAIERFL SPALITQLQR
SNWPGNVREL KNYLERCHVF EEALPVDTMA PRGEVGAVDT SLPFADARQR LLNHFERDYL
SSILAEHEGK VVDAAAAAAV DRTHFYRLLR KHGLNR