Gene Hoch_1751 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1751 
Symbol 
ID8544133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2418532 
End bp2419191 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content72% 
IMG OID646386458 
Product2OG-Fe(II) oxygenase 
Protein accessionYP_003266193 
Protein GI262194984 
COG category[L] Replication, recombination and repair 
COG ID[COG3145] Alkylated DNA repair protein 
TIGRFAM ID[TIGR00568] DNA alkylation damage repair protein AlkB 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00280539 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCGGCA AACAGAACGA GCTGTTTCCG GAGCAGGCGC CGCCGCTGCC CGAGGGGTTC 
CTGCACATCG TGGCTGCGCT CGACCTGGAC GCGCAGGGCG CGTTGCTCGA GCAGGTACGC
GCGGTGCTCG CGGAGGCGCC CGCGTATCGT CCGAGCATGC CCCGCACGGG CGCGCCGCTG
TCGGTGCGGA TGAGCAACTG TGGCACGCTG GGGTGGATCT CCGACCGCGC CGGCTATCGC
TACGAGCCGC TGCATCCGCA CACGGCGCGT CGCTGGCCGG CGATTCCGCC GCTGGCCATG
GCGCAGTGGA ATCGCTTCGC GGACTGGCCG GTGCGCCCCG AGGCGTGTCT GGTCAACCTC
TACCAGACCG GCTCGCGGCT GGGGATGCAC GTCGATCAGG ACGAGCGCGC GGCCGATGCG
CCGGTGGTGT CGATTTCGCT CGGCTGCGAC GCGGTGTATC GGCTCGGCGG CCACACGCGC
AATCTGCCCT CGCAGCGGCT GCTGCTGCGC TCGGGCGACG TGGTGGTGCT CGGCGGCGCG
GCCCGGCGCT GCTACCATGG CGTCGACCGC ATCGTCGCCG GGACCTCGCC GCTGCCCGAG
CTGGAGGCGC GCATCAACCT GACCCTGCGG CGCGTAGAGC CCCTGGACAC CGGCGCATGA
 
Protein sequence
MRGKQNELFP EQAPPLPEGF LHIVAALDLD AQGALLEQVR AVLAEAPAYR PSMPRTGAPL 
SVRMSNCGTL GWISDRAGYR YEPLHPHTAR RWPAIPPLAM AQWNRFADWP VRPEACLVNL
YQTGSRLGMH VDQDERAADA PVVSISLGCD AVYRLGGHTR NLPSQRLLLR SGDVVVLGGA
ARRCYHGVDR IVAGTSPLPE LEARINLTLR RVEPLDTGA