| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1744 |
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| Symbol | |
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| ID | 8544126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 2373780 |
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| End bp | 2376521 |
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| Gene Length | 2742 bp |
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| Protein Length | 913 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 646386451 |
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| Product | Peptidoglycan-binding lysin domain protein |
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| Protein accession | YP_003266186 |
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| Protein GI | 262194977 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTTG GCGGCTCGTT TCGAGGTGGA CCGCAGCAGG GGCAGGGCTC CAGTGCGGCG
GAGAAAAAGC AAAAGGTCGC GCCCGGCAAG AGCACGCGCA CCAGCAAGAT CCGGCCGGCC
CAGGCCAAGC GCGGCGGCGG GGCGGGCGCG GGCGCGAGCG CTGGCAGCGA GGCCGCAGCG
GCGCCGCCTG GTGGAGGCGG TCGGCCCCTG CCCGGGGCGT TGCAGGCCAA GATGGGGCGG
GCCTTTGGCA CCGATTTCTC GGCCGTGCGC GTGCACGAAG GTTCGCAGGC GAGCGCGATC
GGGGCGCTGG CGTACACGCA GGGCAGCGAT ATCCACTTCG CGCCCGGCCA GTACGACCCG
GGCAGCCAGG GCGGCCAGGA GCTGATCGGC CACGAGCTCA CCCACGTGGT GCAGCAGCAG
CAGGGCCGCG TCGCCGCGAC CGCGCAGGCC AAGGGCGTGG CCATCAACGA CGACAGCGCG
TTGGAGCGCG AAGCCGACGA GATGGGCGCC CGCGCCGCGC GCATGGACGC CGGCGCCGGC
TCGGGCGCTG TGTCCGAAAT CCGTCCTGGC GTCGCCGGTC CGGTGCAGCG CCGCGAAGAT
CCCGCCGCCC CGACGCCGGC GGGCACGTCG ACGCCGGCCG CGCCCGCTGC CGACATCCGC
GGCGGCAACG CGCACCTCAT CCGCGCTGGC GACACCCTGT GGAAGATCGC TGAGACCACC
TACGGCCACG GCCGCTACTG GCGCCGCATC ATGGAGGCCA ACCCGAGCAA GGTCGGCCGC
GGCGGCGACC TCATCCTGGT CGGCGACACC TTGCAGCTCC CGGCCATCGA TGTCGCCAGC
GGCCGGGTCG AGACCCCGGC GACGCCGCCC AGACCCGAGC AGCCGGCGGG CGCGGCCGGC
GGCGACGCGC CCACGCCGGA GGGACCGAGC GAGGGACCGG CCGAAGCGCC GCCGCCGCCG
ACGCCCGAGC AGGCCGCGGG CGGGGCCGGG GGCGCAGGCG GCGCGGACAC GCCCGAGCCA
GAGGCCGTGT GCGAGGCCGT GGAGCCGCGC GAGCTGAGCA ACGACTACGG CAGCTTTTCC
GTCTACCCGG ACGATTACCG CGGACCGCTG CCGCCCGCGG GCGTGACTCG CGAGCCCGAT
ATCGAATATC TGCGCGAGAG CGAGTTCGAG CGCGTCGTGG CCGAGCGCGA GGCCGCGGCC
GAAGAGGAGC GCGATCGCAC CATCGGCGAC GTCGAAGAGC TGCTGTCGTA CGGCGCCTTT
GACTGGGCCA TCACCGACGC CGAGGCGCGC CAGGCGCTGA ATCTGCTCGG CGGCTTGCCC
ATGAGCCAGC TCCGCGTGGC CGTGGGCCGC ATCGACAGCG ACCGGCTGCT CGACAACCTG
CCCGAGGACG CCCGGCGCAC GCCGGCCTTT GCCAAGGTCA TCGTGGCCGC GGGCGCCGAG
CACTACCGCG AGCACATCAC CGCGCTCCTG TCCTACGGCG CGTTTGATTG GGCGGTGACC
GACGGCGACG TGCGCAGCAT CAACGATATC CTCGAGGCCG TCGGCGAGGC CGAACAGATC
ACCTTCCTGC GCGGCCTCGA GCCCGACATG CTCAGCCGCT ACGCGCGCAA CATCTCGCGC
GGCACCGGCT CGAACGAGCT GCTCAAGACC GTGTTCGACA TCGTCCCCGA CAGCGACCTC
GACGCCATGC AGACGGTCAT GGAGGCGCGC TTCAACATCG ACCTGCGCTC GTGGGTGGTG
CCGCGCGCGC TGCTGGGTGT GGGCGAGGAC TGGGACGCGC CCGGTCTGCG GCGGCTGTGG
ACCATCTTCG AGGAGCTGCC GCCCGAACAT CTCGAGAACA ACGAGGCGCT CGACCTGTTC
TTGCGCGAAG ATCAAAATGA CGGCTCGGGC TTCTACAACT CCGGCCTCGA TGCCGGCGTC
ATCTCGTACA GCAACACCGG CGAGACCGGC AGCTACGGCC GCATCATGGT GCCGGACGGC
CACGGCGGCA CCAAGGACGT CGGCCTACAT AGCAACGTCA ACCTGTTCAG CACCGTGGTC
CGGCACGAAG TCGGACATGC GGTCGATGCC GACATCGGCG CCAGCGCGCC GGGCGGCTAC
GTGCGCAGCG CGAGCAACGC GGGCGAGTGG GCCACCTACG GCTCGGATGG CGCCTTCGTC
GACGCTATCA TCGCCGCCGG CGGCGGCATG AGCGGTCACG GCTACGCCGA CGAGGCCAAG
TACGAGCGCG CCATGCGCGA CGCGGTGTCC GACGAAGTGG ACTTCACCAC CGCGCTCAAT
GATATCGACG GCTCGGTGGC CGCGCCCAAC GCCTCGGTCA CCGGTCCGGT GGCCGCCGTG
TTCAGCAAGG ACCGTTGGCA CCCCGATACC AGCCCTTGGT ACAACAACGG CGACCGTCAG
GACGTCGGCG GCAGGCTGTG GCAGCGGCCC TACGGCTCGG GCGATTACGC GTCCTTCGTC
AAGTCGGCGC GGGTCGACCA CGGCGTCAGC GCGTATCAGT TCCGCGCGCC GGGTGAGTGG
TTCGCGGAGG CCTACGCGGC CTACTACAGC GACAACGACG GCGCGGCCGG CAACCCCGTG
GGCACGCGCC TGCGCACCCG CGACACCGCG GCCGCCGACT GGTTCGACGC CAATGTCGAC
AACGGCCACT CGCTGCAGCA GCGCGCGGGC GGCGGCGGCG CGGGCGGTGG CGGCGCGGGT
GGCGCGGGAG CCGGCGGCGG CGGCGCGGCG GGGGCGGGAT GA
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| Protein sequence | MAFGGSFRGG PQQGQGSSAA EKKQKVAPGK STRTSKIRPA QAKRGGGAGA GASAGSEAAA
APPGGGGRPL PGALQAKMGR AFGTDFSAVR VHEGSQASAI GALAYTQGSD IHFAPGQYDP
GSQGGQELIG HELTHVVQQQ QGRVAATAQA KGVAINDDSA LEREADEMGA RAARMDAGAG
SGAVSEIRPG VAGPVQRRED PAAPTPAGTS TPAAPAADIR GGNAHLIRAG DTLWKIAETT
YGHGRYWRRI MEANPSKVGR GGDLILVGDT LQLPAIDVAS GRVETPATPP RPEQPAGAAG
GDAPTPEGPS EGPAEAPPPP TPEQAAGGAG GAGGADTPEP EAVCEAVEPR ELSNDYGSFS
VYPDDYRGPL PPAGVTREPD IEYLRESEFE RVVAEREAAA EEERDRTIGD VEELLSYGAF
DWAITDAEAR QALNLLGGLP MSQLRVAVGR IDSDRLLDNL PEDARRTPAF AKVIVAAGAE
HYREHITALL SYGAFDWAVT DGDVRSINDI LEAVGEAEQI TFLRGLEPDM LSRYARNISR
GTGSNELLKT VFDIVPDSDL DAMQTVMEAR FNIDLRSWVV PRALLGVGED WDAPGLRRLW
TIFEELPPEH LENNEALDLF LREDQNDGSG FYNSGLDAGV ISYSNTGETG SYGRIMVPDG
HGGTKDVGLH SNVNLFSTVV RHEVGHAVDA DIGASAPGGY VRSASNAGEW ATYGSDGAFV
DAIIAAGGGM SGHGYADEAK YERAMRDAVS DEVDFTTALN DIDGSVAAPN ASVTGPVAAV
FSKDRWHPDT SPWYNNGDRQ DVGGRLWQRP YGSGDYASFV KSARVDHGVS AYQFRAPGEW
FAEAYAAYYS DNDGAAGNPV GTRLRTRDTA AADWFDANVD NGHSLQQRAG GGGAGGGGAG
GAGAGGGGAA GAG
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