| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1733 |
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| Symbol | |
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| ID | 8544115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 2360935 |
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| End bp | 2361558 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 646386440 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003266175 |
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| Protein GI | 262194966 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00614369 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACGCA GTGACGCCGA GTTGCTGGAG ACCTGGCGTA CCGGAGACGC CGCGGCCGGC
GAGGTGCTCT TCGACCGCTA CTACGACTCG ATCGAACGCT TCTTTCTCAA CAAAGTCTCC
ACCAACGTCG GCGATCTGGT CCAGGAGACC TTCCTGGCCT GCGTCGAGGG CCGCGACCGG
GTCCAGAACA GCGCCAAGTT CCGCTCGTAC CTGTTCTCCA TCGCCTACAA CGTCCTGCGC
GGCCACCTGC GCGGCAACTA CCGCCGCGGC CACGCGCTCG AACTCGACGA GGTCACCATG
GAGCAGCTCA TGCCCGGCGC CGGCACGCTG CTCGGCGAAC GCCGCGAACA GCGCCTATTG
CTCGAGGCGC TGCGCAATAT CCCGCTGCCC TACCAGGTCA TCCTCGAGCT GCACTACTGG
GAGCAGATGA GCACCGAGAA CATCAGCGAA GTCCTCGGCC GCCCGGTCGG TACGGTGCGC
AGCCGCATGC GCCGCGCCCG CGAGTTGCTC GAGGAGATCA TGAGCCGCCT GGCGCATTCG
CGCGACGAGC TCAAGAGCAC GGTGACGCGC CTCGACGACT GGGCCGCTCA GTGCCGGCGC
GATATGCTGG CGCTCAGCTC GTGA
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| Protein sequence | MERSDAELLE TWRTGDAAAG EVLFDRYYDS IERFFLNKVS TNVGDLVQET FLACVEGRDR
VQNSAKFRSY LFSIAYNVLR GHLRGNYRRG HALELDEVTM EQLMPGAGTL LGERREQRLL
LEALRNIPLP YQVILELHYW EQMSTENISE VLGRPVGTVR SRMRRARELL EEIMSRLAHS
RDELKSTVTR LDDWAAQCRR DMLALSS
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