Gene Hoch_1713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1713 
Symbol 
ID8544095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2332261 
End bp2332872 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content74% 
IMG OID646386421 
ProductNUDIX hydrolase 
Protein accessionYP_003266156 
Protein GI262194947 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.108614 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.043111 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATCTTG AGCTGCGCGC GCGCGTCGTG AGGCACCTGG CCGCTTTCGA ACGCATCCCG 
GCCGCGGTCG AGGGACACCG GCGCGCGGCG GTCGCGCTGG TGCTGGTAGA CGACGATCGC
GGGCGGCCGT GCGTGGTGCT CACCCGCCGA CCGCTCGACA TGCCGCGCCA TCCCGGACAG
TACGCGCTGC CGGGTGGACG CATGGAAGCC GGGGAGACCG AGACCGAGAC CGCGCGCCGC
GAGCTCGAGG AAGAGGTCGG CATCGCGCTC GGCGCCGGGG CAGTTCTCGG ACTGCTGGAC
GATTTCGTCA CCCGCTCCGG CTGGGTGATG ACGCCCGTGG TGCTGTGGGG CGGCCCGGGC
CAGGTGTTCG CGCCCGACCC GCGCGAGGTC GCGGCCGTGT ACCGCGTGCC GCTGGCGGCG
CTCGCGCGCG AAAAGACCCG ACGCATCGAA CACATCGCCG AGAGCGAGCG CCCGGTGCTG
TCCCTGGGCA TCGTCGGCAC CCGGGTGTTC GCGCCCACGG CCGCGATTCT GCTGCAGCTC
GCCGAGGTGG CGCTGGCGGG CCGCACCACC CGGGTGGCGC ACTACGAGCA GCCGCTGTTC
GCCTGGCGCT GA
 
Protein sequence
MDLELRARVV RHLAAFERIP AAVEGHRRAA VALVLVDDDR GRPCVVLTRR PLDMPRHPGQ 
YALPGGRMEA GETETETARR ELEEEVGIAL GAGAVLGLLD DFVTRSGWVM TPVVLWGGPG
QVFAPDPREV AAVYRVPLAA LAREKTRRIE HIAESERPVL SLGIVGTRVF APTAAILLQL
AEVALAGRTT RVAHYEQPLF AWR