| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1704 |
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| Symbol | |
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| ID | 8544086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 2317309 |
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| End bp | 2319018 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646386412 |
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| Product | urease, alpha subunit |
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| Protein accession | YP_003266147 |
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| Protein GI | 262194938 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0804] Urea amidohydrolase (urease) alpha subunit |
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| TIGRFAM ID | [TIGR01792] urease, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000469415 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCCACA ACGCCAAGAT CTCGCGCCGC GAATACGCGG AGAAATTCGG ACCGACGGTC
GGCGACCGCA TCCGGCTCGC CGACACCGAG CTGTTCATCG AGGTCGAAAA AGACCACGCC
ATCTACGGCG AGGAGGTCAA ATTCGGCGGC GGCAAGGTGA TCCGCGACGG CATGGGCCAG
TCGCCGCGCG CGCACGCCGA GGGCGCGGTC GACACCGTCA TCACCAACGC CGTGATCCTC
GACTGGTGGG GCGTGGTCAA AGCCGATATC GGCATCAAAG ACGGCCTCAT CGCCGCCATC
GGCAAGGCCG GTAACCCCGA CATCCAGCCC GGCGTCGACA TCATCATCGG CCCCGGCACC
GAGATCATCG CCGGCGAGGG TCGCATCGTC ACCGCCGGCG GCATCGACGC GCACATCCAC
TTCATCGCCC CGCAGCAGAT CGAAGAGGCG CTGTGCTCGG GCATCACCAC CATGCTCGGC
GGCGGCACCG GACCCGCGGC CGGCACCACG GCGACCACCT GCACCCCGGG CCCGTGGCAC
ATCGAGCGCA TGCTCATGGC CGCGCCCGCG TTCCCGATGA ACCTGGGCTT CTTCGGCAAG
GGCAACACCT CGCAGCCGGC CGCCCTGGTC GAGCAGATCG AGGCCGGCGC CTGCGGCCTC
AAGCTGCACG AGGACTGGGG CTCGACCCCG GCCGCGATCC GCAACTGCCT CAGCGTCGCC
GAGCAGTACG ACGTCCAGGT CGCCCTGCAC GCCGACACCC TCAACGAGGC CGGCTTCGTC
GAGGACACGC GCGCCGCCTT CGAGGACCGC ACCGTGCACG TGTTCCACAC CGAGGGCGCC
GGCGGCGGTC ACGCGCCCGA CGTGATCCGT CTGGTCGGCG AGCCCAACGT GCTGCCCTCG
TCGACGAACC CGACCCGGCC GTTCACGGTC AACACCGTGG CCGAGCACCT CGACATGCTC
ATGGTCTGCC ACCACCTCGA CCCCCGGATC GAGGAGGACC TGGCCTTTGC CGAGAGCCGC
ATCCGCCGCG AGACCATCGC CGCCGAGGAC ATCCTCCAGG ACATGGGCGC GATCTCGATG
ATGACCTCGG ACAGCCAGGC CATGGGACGC GTGGGCGAAG TCATCCTGCG CACCTGGCAG
ACCGCGCACA AGATGAAGCT GCAGCGCGAC GGCGACGCCG CGCCGCCCAA CGACAACGCG
CGCGCCAAGC GCTACGTCGC CAAGTACACC ATCAACCCGG CCATCGCCCA GGGCATCGCG
GCGCATGTTG GCTCGGTCGA GGTCGGCAAG CTGGCCGACC TGGTCGTGTG GCAGCCGGCC
TTCTTCGGCG TCAAGCCGGA GCTGGTGATC AAGGGCGGCG CTATCGCCAT GGCGCCGATG
GGCGACCCCA ACGCGTCCAT CTCCACGCCG CAGCCCGTGC ACTACCGGCC CATGTTCGGC
AGCTACAGCC GCTCGCGCGA GGTTGGCTCG CTGCTGTTCG TGAGCCAGGC CAGCATCGAC
GGCGGCATCG AGCAGCGGCT CGGTCTGGGC CGGCGCTGCG TGGCCGTCAA GGGCACGCGC
GGGCTGCGCA AGGCCGATAT GAAGCTCAAC GACCTCGCCC CCGCGATGGA GGTGGACCCG
CTCAGCTACG AGGTCCGCGC CGACGGCGAG CTGCTCACCT GCGAGCCGCT GGCGGTGCTG
CCCATGGCTC AGCGCTACTT CCTGTTCTAG
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| Protein sequence | MAHNAKISRR EYAEKFGPTV GDRIRLADTE LFIEVEKDHA IYGEEVKFGG GKVIRDGMGQ
SPRAHAEGAV DTVITNAVIL DWWGVVKADI GIKDGLIAAI GKAGNPDIQP GVDIIIGPGT
EIIAGEGRIV TAGGIDAHIH FIAPQQIEEA LCSGITTMLG GGTGPAAGTT ATTCTPGPWH
IERMLMAAPA FPMNLGFFGK GNTSQPAALV EQIEAGACGL KLHEDWGSTP AAIRNCLSVA
EQYDVQVALH ADTLNEAGFV EDTRAAFEDR TVHVFHTEGA GGGHAPDVIR LVGEPNVLPS
STNPTRPFTV NTVAEHLDML MVCHHLDPRI EEDLAFAESR IRRETIAAED ILQDMGAISM
MTSDSQAMGR VGEVILRTWQ TAHKMKLQRD GDAAPPNDNA RAKRYVAKYT INPAIAQGIA
AHVGSVEVGK LADLVVWQPA FFGVKPELVI KGGAIAMAPM GDPNASISTP QPVHYRPMFG
SYSRSREVGS LLFVSQASID GGIEQRLGLG RRCVAVKGTR GLRKADMKLN DLAPAMEVDP
LSYEVRADGE LLTCEPLAVL PMAQRYFLF
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