Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_1702 |
Symbol | |
ID | 8544084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 2316028 |
End bp | 2316705 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 646386410 |
Product | Urease accessory protein UreF |
Protein accession | YP_003266145 |
Protein GI | 262194936 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0830] Urease accessory protein UreF |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000278425 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAATCCTG AGGCCCTGCA TCGGCTGATG GCGTGGCTGT CGCCGAGCTA CCCGGTGGGC GCCTTCAGCT ACAGCCACGG CCTGGAGTGG GCGGTGGAGG CGGGCTGGGT CGGCGACGCG GCGGCGCTGC GCGAGTACGT GAGCGAGGCC GTGCGCGAGG GCGGCGGCCA CGTCGACGCC GTGCTCCTGG CGCACGCGCA CGCGGCGGCG GCGGCCATGG ATCTCGGACG CCTGGACGCC CTCATCGAGT TCGCCAACGC GTTTCGCGCC ACCGCCGAGA CCGCGCTCGA GAGTCACGCC CAGGGCCGGG CGTTTTTGCG CACCACCCGC CAGGCCTGGC CCGACGAGCG GCTCGAGACC CTGGCCGGCG TGGTCGGCGG CCGTCTCCTG GCCTATCCCG TGGCCCTGGG CATGGCGGCG GCCGAGCTGC CGCGGCAGCC GGTCCTGGTC GCGTATCTGC ACGCCTTCGC CGCCAACCTG GTCTCCGCCG GCGTCCGCCT GGTCCCTCTC GGACAGACGG ACGGCCAACG CGTCCTCGCC GACATCGGCG GCCTCCTCGC CGACGAGGCC GCGCGCGCCC AGCGCATCCC GCTCGACGAG CTGAGCACCG GCGCTCCGCT CCTGGACGTC GCCTCCATGC GACACGAAAC CCAATACACG AGGCTATTTC GCTCATGA
|
Protein sequence | MNPEALHRLM AWLSPSYPVG AFSYSHGLEW AVEAGWVGDA AALREYVSEA VREGGGHVDA VLLAHAHAAA AAMDLGRLDA LIEFANAFRA TAETALESHA QGRAFLRTTR QAWPDERLET LAGVVGGRLL AYPVALGMAA AELPRQPVLV AYLHAFAANL VSAGVRLVPL GQTDGQRVLA DIGGLLADEA ARAQRIPLDE LSTGAPLLDV ASMRHETQYT RLFRS
|
| |