Gene Hoch_1702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1702 
Symbol 
ID8544084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2316028 
End bp2316705 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content73% 
IMG OID646386410 
ProductUrease accessory protein UreF 
Protein accessionYP_003266145 
Protein GI262194936 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0830] Urease accessory protein UreF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000278425 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATCCTG AGGCCCTGCA TCGGCTGATG GCGTGGCTGT CGCCGAGCTA CCCGGTGGGC 
GCCTTCAGCT ACAGCCACGG CCTGGAGTGG GCGGTGGAGG CGGGCTGGGT CGGCGACGCG
GCGGCGCTGC GCGAGTACGT GAGCGAGGCC GTGCGCGAGG GCGGCGGCCA CGTCGACGCC
GTGCTCCTGG CGCACGCGCA CGCGGCGGCG GCGGCCATGG ATCTCGGACG CCTGGACGCC
CTCATCGAGT TCGCCAACGC GTTTCGCGCC ACCGCCGAGA CCGCGCTCGA GAGTCACGCC
CAGGGCCGGG CGTTTTTGCG CACCACCCGC CAGGCCTGGC CCGACGAGCG GCTCGAGACC
CTGGCCGGCG TGGTCGGCGG CCGTCTCCTG GCCTATCCCG TGGCCCTGGG CATGGCGGCG
GCCGAGCTGC CGCGGCAGCC GGTCCTGGTC GCGTATCTGC ACGCCTTCGC CGCCAACCTG
GTCTCCGCCG GCGTCCGCCT GGTCCCTCTC GGACAGACGG ACGGCCAACG CGTCCTCGCC
GACATCGGCG GCCTCCTCGC CGACGAGGCC GCGCGCGCCC AGCGCATCCC GCTCGACGAG
CTGAGCACCG GCGCTCCGCT CCTGGACGTC GCCTCCATGC GACACGAAAC CCAATACACG
AGGCTATTTC GCTCATGA
 
Protein sequence
MNPEALHRLM AWLSPSYPVG AFSYSHGLEW AVEAGWVGDA AALREYVSEA VREGGGHVDA 
VLLAHAHAAA AAMDLGRLDA LIEFANAFRA TAETALESHA QGRAFLRTTR QAWPDERLET
LAGVVGGRLL AYPVALGMAA AELPRQPVLV AYLHAFAANL VSAGVRLVPL GQTDGQRVLA
DIGGLLADEA ARAQRIPLDE LSTGAPLLDV ASMRHETQYT RLFRS