Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_1691 |
Symbol | |
ID | 8544073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 2301011 |
End bp | 2302168 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 646386399 |
Product | SMC domain protein |
Protein accession | YP_003266134 |
Protein GI | 262194925 |
COG category | [R] General function prediction only |
COG ID | [COG4637] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.253328 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000000699352 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTGTCCG CGCTCGCCAT CTCGGGATAC CGCTCGCTGC GCGATGTCGT GCTGCCGCTC GATCGCCTCA ACGTCGTCAC CGGCCCCAAC GGCAGCGGCA AGTCCAGCTT GTACCGCTCC ATCCGCTTGC TGGCCGATGT CGCCCAGGGC CGTATCGTGG CCTCGCTGGC GGCCGAAGGC GGGCTCAGCT CGACGCTGTG GGCCGGGCCC GAGGCCTTCT CCCAGGGCAT GAAGCGCGGC GAGGTGGCGA TTCGCGGCAC CGCGCGCAAA GAGCGCGTGA GCCTCAAGCT CGGCTTCGCC GGCGAGGATT ACGGCTACGC CATCGATCTC GGCCTGCCGC CGCCGCTGCG CAGCGCCTTC GACCGCGACC CTGAGATCAA AGCCGAAGCG GTGTGGACCG GCGAAGTGCT CGCGCGCAAC AGCCTGTTTG CCTCGCGCCG CGGTCCCAGC GTCACCGTGC TCGACGACCA GGGCCAGCGC CGGCTGATAA GCGCGCAGAT GGCGCCCTTC GACAGCATGA TGACCCACGC CGCCGACCCG CGCGGGGCGC CCGAGCTGCT GGTGCTGCGC GAGCGCATGC GCGCCTGGCG CTTCTACGAC CACCTGCGCA GCGACGCCCG CGCGCCCGCG CGTCGCCCCC AGGTCGGCAC GCGCACGCCC GCGCTCGCGG CCGATGGCGG CGATCTCGCC GCCGCGCTGC AGACCATCGT CGAGATCGGC GATCACGAGG CGCTGCTCGA CGCGGTCAGC GACGCCTTCC CCGGCGCGGA CATCGAAATC GCCGTGAGCG CGGACGGCCT GTTCGAGCTC ACCATGCATC AGCGCGGGCT GCTGCGGGCG CTGCGCGCGG CCGAGCTGTC GGACGGCACG CTGCGCTACC TGTGCCTGGT GGCCGCGCTG CTGTCGCCGC GACCGCCCGG CCTGCTGGTG CTCAACGAGC CCGAGGCCAG CCTGCATCCG GATCTGCTGG CGCCGCTCGC GCGCCTCATC GCCGACGCGG CCACGCGCTC GCAGCTCATC GTGGTCACCC ACGCCGCGGC GCTGGTGAGC GCGCTGGCCG CGCACGAGCG CTGCGAGCTG CTGGCCCTCG ACAAGCAGCT CGGCGAGACC GTGCTCGAAG CGCACGAGCG CCCGCGCTGG ACCTGGCCCA AACGCTGA
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Protein sequence | MLSALAISGY RSLRDVVLPL DRLNVVTGPN GSGKSSLYRS IRLLADVAQG RIVASLAAEG GLSSTLWAGP EAFSQGMKRG EVAIRGTARK ERVSLKLGFA GEDYGYAIDL GLPPPLRSAF DRDPEIKAEA VWTGEVLARN SLFASRRGPS VTVLDDQGQR RLISAQMAPF DSMMTHAADP RGAPELLVLR ERMRAWRFYD HLRSDARAPA RRPQVGTRTP ALAADGGDLA AALQTIVEIG DHEALLDAVS DAFPGADIEI AVSADGLFEL TMHQRGLLRA LRAAELSDGT LRYLCLVAAL LSPRPPGLLV LNEPEASLHP DLLAPLARLI ADAATRSQLI VVTHAAALVS ALAAHERCEL LALDKQLGET VLEAHERPRW TWPKR
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