| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1689 |
|---|
| Symbol | |
|---|
| ID | 8544071 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 2299434 |
|---|
| End bp | 2300165 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 646386397 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_003266132 |
|---|
| Protein GI | 262194923 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2910] Putative NADH-flavin reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0189126 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.0000000628331 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCCA TCGAAAAACA GGTTCGTCCT CGCAGCATGC GGCGTGTGTG CATCATCGGC
GCGTCCGGCA AGCTCGGCCG CTACATGATC GGCCACGCGC TCGAGCGCGG CTACGAGGTG
GTCGGCGTGT GCCGTGAGCA GAGCGTCCAC AAGCTGGACG ATTTCGCCGA TCGCATCACC
ATCATCCCCG GGGCCTGCGA CGACGCCGAG GTCATCGCGC GCGCGGTCAA AGGCTGCGAC
GGCGTGCTGT CCGTACTCGT CCCCTGGGGC ATGCAGGGCC ACGCCACGGG CACGGCGCAG
GCGGTGCTCG ACCACGCCGA GGAGGGCGCG CGGCTGGTGT TTAGCTGCGG CTGGCACATC
ACGCGCGACG GCCGCGACGT GTACTCGCGC AAGCTGCGCG CGTTCGTGGC CGTGTTCGGC
TGGCTGGCGC GCGTGACCCG CTTCGCCGAC CTGGACGACC AGGTCGAGGC CTGCCGGCGC
ATCTTCGACA GCGATCGCCA CTGGACCGTG GTGCGCGGCA GCAACCTCGA GGAGGGCGAG
AGCCAGGGGC TGCCGGTGTG GTGCCGACAC GTCGGCGACC CGCGGCTGGC CAGCAACCTC
ACCCGGCGCA TCGACTTCGC GCTGTTCATG GTCGCCGCGC TCGAGGACGA CAGCCTGGTC
CAGGAAGCCC CCGCCATCGT CGGCTGCGCC ACCGAGTCGG CGCAGGCCTA TCCCCAGGCC
GTGGCCGCGT AG
|
|---|
| Protein sequence | MSSIEKQVRP RSMRRVCIIG ASGKLGRYMI GHALERGYEV VGVCREQSVH KLDDFADRIT
IIPGACDDAE VIARAVKGCD GVLSVLVPWG MQGHATGTAQ AVLDHAEEGA RLVFSCGWHI
TRDGRDVYSR KLRAFVAVFG WLARVTRFAD LDDQVEACRR IFDSDRHWTV VRGSNLEEGE
SQGLPVWCRH VGDPRLASNL TRRIDFALFM VAALEDDSLV QEAPAIVGCA TESAQAYPQA
VAA
|
|---|
| |