| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1660 |
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| Symbol | |
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| ID | 8544042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 2261389 |
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| End bp | 2263557 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 646386368 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein |
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| Protein accession | YP_003266103 |
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| Protein GI | 262194894 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02437] fatty oxidation complex, alpha subunit FadB |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCAAG GACAATCGCT GCGCGTCACG CGCATTTCCG ACCACTTTGC CGAAATCTGC
TTCGACCGCG AGGGCGAGGC CATCAACAAG CTCGACAAGC GCACGGTCGA CGAGCTCGGC
ACCGCCGTGT CCAGCATCGC GGACGACGGC GATGTGCGCG GCGTGCTGAT CACCAGCGCC
AAGAAGGTGT TCATCGTCGG CGCCGACATC ACCGAGTTCG GCGCCCTGTT CGCGTTGCCG
GTAGAGCGAC TGGTGGCCAC CAACAGCGCC TCCAACAGCA CCTTGACCGC GCTCGAGAGC
CTGCCCGTGC CCTGTGTGGT CGCGCTCGGC GGTGTCGCGC TCGGCGGCGG TCTGGAGCTG
GCGCTGGCCG CCGACTTCCG GGTGATGTCC ACGGCCGCAC AGGTAGGTCT GCCCGAGGTC
CAGCTCGGTC TGTTCCCGGG CTTTGGCGGC ACTGTGCGCC TGCCGCGTAT CGCCGGCGCC
GCGGTCGCCA TCGAGTGGAT CACCAGCGGC GCGTCGGCGG GCGCCGAGGC CGCGCTCGCG
GCCGGCGTGG TCGACGAGGT GTGCGCGCCC GAGAAGCTGC GCGAGCGCGC CTTGACCCTG
CTGCGCACCG CGGTCGCCGG CGAGCGCGAC TGGCACGCGC GGCGTCGGGC AAAGGATGCG
CCGCTGCCGC TGAAGGACGA CGAGCGCGCG GCGCTGTTCG GCGCGGCTCG CGAGCAGGTC
GCGCGGCGCG CTCCCAAGCA TCAACCCGCG GCCATGAGCG CGCTCGAGGC GATGGCGCGG
GCGGCGACGG CCGAGCGCAC GCGCGCGCTC GAGATCGAGG CCCGCGCCTT TGCCGAGGTC
GCCAAGACCC AGGCCGCGGA TGCGCTGGTG CAGACATTTC TCAGCGGACA GCAGGTCAAA
AAAATCACCC GCGGCTACCG CGAGCTGGCC GCCCCGGTCG CGCGCGCGGC CGTGCTCGGC
GCCGGCATCA TGGGCGGCGG CATCGCCTAC ACCAGCGCGC TGCGCGGTGT TCGCGTGATC
CTCAAGGACA TCGCCCAGGC CCAGCTCGAG CGCGGAATGG ACGAGGCCCG CGGGCTGCTG
GGCAAGCGGG TCAAGCGCGG CAAGATGAAC CAGGAGCAGG CCGACGCGGT GCTGGGCGCC
ATCACGCCGC AGCTCGATTA CACGGATTTC GACCAGGTGG ACGTCGTCGT CGAGGCGGTG
AGCGAGTCGC TCGCGCTCAA ACACCAGGTG CTCGCCGAGG TCGAGGCCCA GGTGCGCGAG
GGCGCGATCC TGGCGAGCAA CACCTCGAGC CTGCGCATCG ACGAACTGGC GCCCGCGCTG
GCGCGTCCCG AGAACCTGGT CGGCATGCAC TTCTTCAACC CCGTGCCCGC GATGCCGCTG
GTCGAGATCA TCCGCGGCTC GCGCACCAGC CCCGCGGCGC TCGCCACCGT GGTTGGCTAC
GCCGAGGCCA TGGGCAAGAC CCCGATCGTG GTCGCCGATG GCCCCGGGTT TCTGGTCAAT
CGCGTGCTCA CGCCGTACAT GCAGGCCTTT GCCAAGCTGG TCGCCGATGG CGCCGACTTC
GTCCAGGTGG ACGCCGCCAT GGAGGCCTTT GGTTGGCCCA TGGGCCCGGC GTATCTCAAC
GACGTGGTCG GCATGGACAC CGCCGTCCAC GTCGCCGAAA TCATCATCGC CGGCTTCCCC
GAGCGCATGG CGCGGATGGC GCCGGATCCG CTGGCGCTCA TGGTCGAGCG CGGCCGCCTG
GGCCAGAAGA GCGGCCTCGG CTTCTACCGC TACCAGGCCG GTGCTGGCGG CAGACCCGAA
AAATCCGTGG CCGAGGACAG TCGGGCGCTG CTCGCGGCGC TGCAGGAGGA GGGATCCTCC
ACTGTGACGG ACGGCGAGAT CGTCGAGCGC ATGATGCTGC CGATGATCTT CGAGGCGGCG
CAGTGCCTCG AGGAGGGCGT GGTCGGCAGC GCGCCCGAGC TGGACCTGGC CATGCTCTTG
GGCGTCGGCT TCCCGGCTTA CCTCGGCGGT CCGCTCAAGT ACGCCGACTG GTTGGGCGCG
CGCGAGCTGC TCGCCCGGGC CCAGCGCTAT GCGCATCTGG GCCCGCAGTA CACGCCGCCG
CGCAGCGTTC GCGACATGGC CGAAGGCGGG AAACGCTTCT ACCCGAGGCC GAGCGCGACC
GCCTCTTGA
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| Protein sequence | MFQGQSLRVT RISDHFAEIC FDREGEAINK LDKRTVDELG TAVSSIADDG DVRGVLITSA
KKVFIVGADI TEFGALFALP VERLVATNSA SNSTLTALES LPVPCVVALG GVALGGGLEL
ALAADFRVMS TAAQVGLPEV QLGLFPGFGG TVRLPRIAGA AVAIEWITSG ASAGAEAALA
AGVVDEVCAP EKLRERALTL LRTAVAGERD WHARRRAKDA PLPLKDDERA ALFGAAREQV
ARRAPKHQPA AMSALEAMAR AATAERTRAL EIEARAFAEV AKTQAADALV QTFLSGQQVK
KITRGYRELA APVARAAVLG AGIMGGGIAY TSALRGVRVI LKDIAQAQLE RGMDEARGLL
GKRVKRGKMN QEQADAVLGA ITPQLDYTDF DQVDVVVEAV SESLALKHQV LAEVEAQVRE
GAILASNTSS LRIDELAPAL ARPENLVGMH FFNPVPAMPL VEIIRGSRTS PAALATVVGY
AEAMGKTPIV VADGPGFLVN RVLTPYMQAF AKLVADGADF VQVDAAMEAF GWPMGPAYLN
DVVGMDTAVH VAEIIIAGFP ERMARMAPDP LALMVERGRL GQKSGLGFYR YQAGAGGRPE
KSVAEDSRAL LAALQEEGSS TVTDGEIVER MMLPMIFEAA QCLEEGVVGS APELDLAMLL
GVGFPAYLGG PLKYADWLGA RELLARAQRY AHLGPQYTPP RSVRDMAEGG KRFYPRPSAT
AS
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