Gene Hoch_1657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1657 
Symbol 
ID8544039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2256646 
End bp2257851 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content70% 
IMG OID646386365 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_003266100 
Protein GI262194891 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.698846 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCCT ACATCTACGA TCACGTCCGC ACGCCGCGGG GCAGGGGTCG CGCCGAGGGC 
AGCTTGCACG AGATCACGCC GATCCAGCTC GCGGCCCAGA CGCTCTCGGC TCTGCGCGAG
CGCAACGAAC TCGACACCGC CCTGGTCGAC GACGTGATCC TCGGCTGCGT GTCGCCGGTG
GGTGAGCAAG GCGCCAATCT CGGACGCGTG GCCGCACTCC GCGCGGGCTT CGCCGAGACG
GTCGCCGGGC AACAGATCAA TCGCTTCTGC GCCTCTGCGC TCGAGGCCGT CAATCTCGGC
GCCGCCGTGG TCCACGCGGG CGCGGCCCAG GCCGTGATCG CGGGCGGCGT GGAGTCGATG
TCGCGGGTGC GCATGGGCTC GGACGGCGGC CCCTGGTATT CCGACCCGCA GACCACGTGG
GCGTGTGGCT ACTCGCCGCA GGGCATCGGC GCCGATCTGC TGGCAACGCT CGACGGCTAC
AGCCGCGACG ATCTCGACGT GTTCGCCCTG GCCTCGCAGC AGCGCGCGGC CCGGGCCTGG
AAGCAGAAGT ACTTCCGCGC CTCGATCGTG CCGGTGTGCG ATCTCATGGG CGAGATCGTT
CTCGACCACG ACGAGCACAT GCGCCCGGAC ACCCGTCCCG AAGACCTGGC GCGGCTGCGG
CCGGCGTTCG CGGCTATGGG CGAGAGCCAG GGCTTCGACG CCGTGGCCCT GCAGCGCTAC
CCCGAGGTCG AGCGCATCGA GCACCTACAC ACCGGCGGCA ACTCCTCGGG CATCGTCGAT
GGCGCCGCGG CCGTGCTCAT CGGCGATCGC GATTTCGGAC GCGCCACCGG AATGCGTCCG
CGGGCGCGCA TCCGCGGCTT TCGCTCGATC GGTTCGGAGC CGACCCTGAT GCTCAGCGGG
CCGGGGCCGT GCAGCCGACA GCTCCTCGAG CGTCTGGGCA TGCACACCCA CAACATCGAT
CTCTTCGAGG TCAACGAGGC CTTTGCCGCG GTCGCCCTGC GCTTCATGCG CGACATGGAG
ATCGAGCACG ACAAGACCAA CGTCAACGGC GGCGCCATCG CGATGGGGCA TCCGCTGGGC
GCGACCGGGG CCATGCTCCT GGGTATCGCG CTCGACGAGC TGGAGCGCCG CCAGCTCAGC
ACGGCTCTGG TCACGCTGTG CGCGGCCGCC GGCATGGCCA CTGCCACGGT CATCGAGCGG
GTGTGA
 
Protein sequence
MEAYIYDHVR TPRGRGRAEG SLHEITPIQL AAQTLSALRE RNELDTALVD DVILGCVSPV 
GEQGANLGRV AALRAGFAET VAGQQINRFC ASALEAVNLG AAVVHAGAAQ AVIAGGVESM
SRVRMGSDGG PWYSDPQTTW ACGYSPQGIG ADLLATLDGY SRDDLDVFAL ASQQRAARAW
KQKYFRASIV PVCDLMGEIV LDHDEHMRPD TRPEDLARLR PAFAAMGESQ GFDAVALQRY
PEVERIEHLH TGGNSSGIVD GAAAVLIGDR DFGRATGMRP RARIRGFRSI GSEPTLMLSG
PGPCSRQLLE RLGMHTHNID LFEVNEAFAA VALRFMRDME IEHDKTNVNG GAIAMGHPLG
ATGAMLLGIA LDELERRQLS TALVTLCAAA GMATATVIER V