| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1635 |
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| Symbol | |
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| ID | 8544017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 2229492 |
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| End bp | 2231129 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 646386343 |
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| Product | SMP-30/Gluconolaconase/LRE domain protein |
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| Protein accession | YP_003266078 |
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| Protein GI | 262194869 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3386] Gluconolactonase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.260295 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCGAT TCCTCCTCGT CCCGCTCGCC CTCGCGCTGC TTGTGCCCGG CGGCCACGCG
CAGGCAGAGC CCGCGTATCG CCAGGAGGTC GTGATCGCCG GCTCGCCCTT CCAGGGCGTG
CATGGCCTGG CCGTCGACGG CGATCGCCTG CTGGCGAGTA ACCTTCTCGG ACAGTCGGTC
CACAGCGTCG ATCTGCGCAC CGGCGCGGTC AGCACCGTGG TGGGGCCGCC GCTCGGCGGC
GCCGACGACG TCGCCGTGGG CGCCGACGGA TCCATCTACT GGACCGGCTA CTTCACCGGC
CGGCTGATGC GCCGCACGCC CGACGGCAAA ACCCGCGTCA TCGCCCGCGA CCTGCCCGGC
CTCAACTCGC TGGCCTTCCG CGCCGACGGC CGCCTCTACG TCACCCAGGT CGGCCGCGGC
GACGCGCTGT GGGAAGTCGA CCCAGCCGGT CAAAAACCGC CGCGCAAGCT GCACGAGGGC
ATCGGTTTCC TCAACGGCTT CGAATTCGGC CCCGACGACC GCATCTACGG TCCGCGCATG
ATGACGCGCG AGATCATCCG CCTGGACGTC GACAGCGGCG CCATCGAGGT CGTCGCCGAC
GGCTTCATCG CGCCCACCGC GGTCAACTTC GACAGCCGCC GCCAGAACCT GTACGTCACC
GACACCTCGA GCGGCGCGCT GGTGCGCGTC GAGGTGGCCA CCGGTGCCAG GGAGGTCGTG
GCCGAGCTGC CCTCGGGCCT CGACAACCTG GCCATCGGTC CCGACGATCG CATCTACATC
TCCAACATGA TCGATAACGA CATCCGCGTA TTCGACCCCG CGGACGGCTC GCTGCGGCAT
CTGGTCGAAT CCCGCCTGAG CGTGCCCGCC GGCCTGTTCA TCGATCCCGA AGATCCCGCC
GAGCGGCTGT ATCTCGCCGA TGTCTTCGCC CTGCGCCGGG TGCGCACCAG CGACGGCCGT
GTCACCAAAA CCGGCCGCGT GCTGTCCACG GCCATGACCT TCCCCATGCA CGTGAGCGCC
ACCGCCGAGC ACCTGGTGCT CAGCAGCGCG TTCATCGGCA ACGTCCAGGT CATGGACCGC
GCGTCCGGAA ACATCCTGCA CACCGTGCCC AACGGCAACG GCGTCCAGGG CGCGATCGAG
CTCGAGGGCG GCGCGCTGCT GATCGCCGAA GCCGGCACCG GCCGCCTGGT GCGCGTGGAG
CTGAGCGGCG GCGACGCGAG CAGCTCCGTG CTGGTCTCCG GCCTGGGCGG ACCGGTGGGC
CTCATCGCCG CGCGCGACGC CGACGAGCCC AGCGTGTACC TCACCGAGGT GAAGGCCGGG
CGGGTCACCG AGGTGCGCCT GAGCGACGGC CGCCGCCGGG TCGTGGCCAA GGGGCTGCGC
GCGCCCGAGG GCATCGCCCA GCACCCCGAC GGCAGCTTGA TCGTCGCCGA GGTCGGCCGC
AAACGGCTGC TGCGCATCGA TCCCGACACC GGCCGCCGCA GCGTGATCGC CAGCGACCTG
CGCATCGGCC TGCCCGAGAA CGACGGCCTG CCGCCGGGCT TCATGCCCAC GGGCGTGGCC
GTCGGCGCCT CCGGGACCAT CTACATGAGC TCCGACCTCG ACAGCGCGCT GCTGCGATTC
GTCCCGATCG CGCCCTGA
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| Protein sequence | MYRFLLVPLA LALLVPGGHA QAEPAYRQEV VIAGSPFQGV HGLAVDGDRL LASNLLGQSV
HSVDLRTGAV STVVGPPLGG ADDVAVGADG SIYWTGYFTG RLMRRTPDGK TRVIARDLPG
LNSLAFRADG RLYVTQVGRG DALWEVDPAG QKPPRKLHEG IGFLNGFEFG PDDRIYGPRM
MTREIIRLDV DSGAIEVVAD GFIAPTAVNF DSRRQNLYVT DTSSGALVRV EVATGAREVV
AELPSGLDNL AIGPDDRIYI SNMIDNDIRV FDPADGSLRH LVESRLSVPA GLFIDPEDPA
ERLYLADVFA LRRVRTSDGR VTKTGRVLST AMTFPMHVSA TAEHLVLSSA FIGNVQVMDR
ASGNILHTVP NGNGVQGAIE LEGGALLIAE AGTGRLVRVE LSGGDASSSV LVSGLGGPVG
LIAARDADEP SVYLTEVKAG RVTEVRLSDG RRRVVAKGLR APEGIAQHPD GSLIVAEVGR
KRLLRIDPDT GRRSVIASDL RIGLPENDGL PPGFMPTGVA VGASGTIYMS SDLDSALLRF
VPIAP
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