| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1615 |
|---|
| Symbol | |
|---|
| ID | 8543997 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 2206601 |
|---|
| End bp | 2207767 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 646386323 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003266058 |
|---|
| Protein GI | 262194849 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACAC CAAGCCGCTG GCGCCGATGG GCGCGGCGCC TCGCATATGT TGGCCTGATT
CTGGGCGTGC TCGCCGCCGT GCTGCTGGCC CTGGCCTGGC GCGCGCTGGG CAAGGGCGCC
GACGGCGAAC GGCTGACGCG CATGGGGAGC TCGCCGCAGT GGGCGGGCGA GAGCTTCGAC
AACCCGCTGC CGCTGTGGAA CGACCCCTGG GGCATGCTCA GCGCGTTCTG GGATGCCAGC
GACTACACCA CGCCGTCGCA GCCGCTGCCC GTGGTGCGGC CGGATCCGGC GCTGTTCGAC
ACGCCGCCGG AGAGCGGTCT GCGCATCACC TGGCTGGGTC ACTCGACGGT GCTCATCGAG
ATCGACGGCG TCCGCGTGCT CACCGATCCA GTGTGGGGCG AGCGCACCTC GCCGCTGTCC
TTCATCGGAC CCGAGCGCTG GTACGCGCCG CCGCTGGCGC TGGCCGATAT GCCGCGCATC
GACCTCGTGC TCATCAGTCA CGACCACTAC GACCACCTCG ACGCGCCGAC CATGGAGCAG
CTCGGCGACT GGGATACGCA GTTCGTGGTG CCGCTCGGCG TCGGCGCGCA TCTCGAATAC
TGGGGCATCG CGCCCGAGCG TATCCGTGAG CTGGACTGGT GGGATCGCGT GCAGGTGGGC
GCGCTCGAGC TGGTGTGCAC GCCCGCGCGG CACGCCTCGG GCCGCCACGT ATTCGACCGC
AACGCCACGC TGTGGGCCGG TTACGCGCTG CTCGGCGACG CGCATCGGGT GTTCTTCTCG
GGCGATACCG GCCTGTTTCC CGAGCTGGCC GACATCGGCG AGCGCTTTGG ACCCTTCGAC
GTCTCCATGA TCGAGGTCGG CGCCTACCAC CGCGCCTGGC CCGACTGGCA CATGGGCCCC
GAGCAGGCCG TGCGCGCCCA CGGCATGGTC CGCGCGCGCA CCTTCCTGCC GATTCATTGG
GGACTCTTCA ACCTGGCCAT GCACGGCTGG ACCGAGCCGG TGGAGCGCAC CATGGTCGCG
GCCGAGCGCG CGGGCGCGCG GGTGCTGGTG CCGCGGCCGG GCGAGAGCCT CGAGCCGGCG
AGCGCGCGCA CCGAGCGCTG GTGGCCCGAG GTGCCCTGGG AGACCGCTGA AGAGCACCCC
ATCGAGGCCA CCGGCCTGCC CGAGTAG
|
|---|
| Protein sequence | MQTPSRWRRW ARRLAYVGLI LGVLAAVLLA LAWRALGKGA DGERLTRMGS SPQWAGESFD
NPLPLWNDPW GMLSAFWDAS DYTTPSQPLP VVRPDPALFD TPPESGLRIT WLGHSTVLIE
IDGVRVLTDP VWGERTSPLS FIGPERWYAP PLALADMPRI DLVLISHDHY DHLDAPTMEQ
LGDWDTQFVV PLGVGAHLEY WGIAPERIRE LDWWDRVQVG ALELVCTPAR HASGRHVFDR
NATLWAGYAL LGDAHRVFFS GDTGLFPELA DIGERFGPFD VSMIEVGAYH RAWPDWHMGP
EQAVRAHGMV RARTFLPIHW GLFNLAMHGW TEPVERTMVA AERAGARVLV PRPGESLEPA
SARTERWWPE VPWETAEEHP IEATGLPE
|
|---|
| |