Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_1592 |
Symbol | |
ID | 8543974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 2176748 |
End bp | 2180191 |
Gene Length | 3444 bp |
Protein Length | 1147 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 646386300 |
Product | Capsule polysaccharide biosynthesis protein |
Protein accession | YP_003266035 |
Protein GI | 262194826 |
COG category | [R] General function prediction only |
COG ID | [COG5610] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.80092 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAATCC TCTACTACCT TGAGCCGATG ATCGAACTCG GCAACCCCTT GTTCCGCATG GGGACGGTTC GAAATCACTT GGACAGAGAG GTCAAGGCGC TCCAAGCTCA CCCCAAGGAG CGCATCGAGG TACGGGTGCT GTGCTCCGAG GCCGTCGCTC GCGAGTCCAA AGCCAATGGC TTGCTCAAAG ACGCGACGGT GTCGACGGTC GACGCCGAGC GTCTGCAGCG CGCCTTTCCC GACTATCAGA GCATCTCGAG CGCCTGGTAC AGGGGCAGCT ATTCGCCAAA CGACAGCATG TACATGATGG GGCTGGTCGC CGAAGCCCTC GAGGGCTTCG TCCCCGACGT CATCATCTGT TACGAATCGT CGGCGCCGTT TTTGAGCGAG TTGTTCCCGC GGGCGCTGTT TCTCAACAGC ATGCTCGGTC TGCTGTCGCG TCCGCCCTAT CCGGAGATGT CGTATCTCGA CCCCGTGGGC ATCGGGCGCT ATTCGTCGTT GATTCAGTTC CAGGATCAGC TCCGCGCGCA CACCATCGAC GACGCCGCGC GCGCGCGGCT CGAGCACATG AAAGAGCGCT ATCGCTGGAC CCTGCTCAAG TACTCGCCGG TGCGCGCGGG CATGATCCGC CAGGGCTTCG ACCGCGTGCT GCTGGTGCCG CTGCAGGTCT CGAAGTACTT CATGTTCAAC GATAACTGCC GCGACGAGCA GCCCTTTGGC AACCAGCTCG ATTTCCTGCG CCACGTCGCC GCGCGCGTCG ACCGCAACAT CGGCCTATTC GTGACCATGC ACGGCGCCGA GACCGCGTAC ATGAGCGACG AGGTCCTGCG CGGCCTGAAA ACCGAATTTC CCAACATCAT GTTTTCGTCC GGGCTGCAGG AGCTGCGCTG GTCGTCGCAG CACATTCTGC CGCACGTCGA CGGCGTGGTC ACGGTGTCGA GCAGCGTCGG CATGCAGACC CTGCTGTGGG ATATTCCGGT GTTCTGCGCC GGTATGTCGC ATGTCAACGC CATCTCGTCG GGGGCGGTGG AGGACATCGA CGCGGTCCTC GGCGAGGACA GCTTCGCGCC CAAGGACGAG ATCTTCCACT TCCTGCTCAC GCGCTATTCG CCGCTGCTCG ACCGCTATCA CCACGATCCG GTGTGGTTTC ACGATTTCCT CGAGCGCGGT ATTTCCATGC GCGAAGTGGC GCCGCTGGGG CTCGATTTCT TCGCCCCCAT CGACGACGAG GAGCGCTTGT TTCTGGCCCT GGAAGAGGAC CTGCGGGTCC CCGCCTACCA CGCCGATCTC AAGCGCTCGA AGAAGAGCTT CTCGATCTCG CGCACGGCCG ACCTGGTGTC GGCGCACGCC AGCGTGGTCT CGGCCGATAT CGTCAGCTTC GATGTCTTCG ACACCCTGCT CACGCGCGAG CTGGCCGAGC CCGCCACGGT GTGGGACCTG GTTCGGCTCG AGGCCGAGCG CACCCTGCCG GAGCTGCGCT GGTCGTCAGC GCAGCCCTTT GCCCAGCTCC GCCGCGACGC CGCGCAGCAA GCGGCCGAAG CGGCCCGCGC CGAGGGCAAG GAGGAGTACA CGCTGGCCGC GGTCTACGAG TCTATCGGCG AGCAGCTCGG GCTCTCCAAG GCCGACGCTG ACGCCTTGCT CGCGCTCGAA TTGCAGGTCG AGCGGCGTGT GCATCGCAAG CCCCGGCGCC GCGGTTGGAT GCTGTATCAA GAGGCCAAGG GCCTGGGCAA GCGCGTCATC GCGGTCTCGG ATACCTACCT GCCCAAGGAC TTCGTCGCCT CGCTGCTCGC GGATGCTGGC TACGAGCTCG ACGAGCTGTA CACCTCGAGC GAATACGAGC GGCTGAAGAA GACCGGCGCG CTGTTCACCA TCGTCCGCAA ACGCGAGGGC CGCAAGAAGC GCATCCTGCA TATCGGCGAC AATTACCTGT CCGACGTGCA GATGGCCTCG GCCAAGAAGC TGCAAGCCTT CCACCTGCCG AACCTGAGCG AAATCTATGC GGAATCATCG AAAGGTCCGG GGTGGACGCG CGGCGACCTC GCCGCGAGCT GCGGCGCCTC GCTGATGCAC GGCGCCATCT CGCGCAAGTT CTTCGACGAG GAGCCGCCCG AGGATTCGTG GCTGGGCGGC AGCCCCTACC GGCTCGGCTA CGTGGCCGGC GGGCCGCTGG TGCTCGCGTT CACCGCCTGG CTGGTCGAGC AGCTCGCCGA TGCCGACATT CGCCGCGCCT ATTTTCTGGC GCGCGACGGC TACCTCATCC GCAAGATCTA CGAGCTGATT CGCCAGCACA ATCCCGCGCT GCCGGAGGCG CGCTATCTGC TCGCCTCGCG CCGCGCCTAC AGCTTCCCCT CGGTCAAGGA CGAGCAAGCG CTGCTCAAGA CCCTCGACTG GCGCTTCAGC GAATGCCCCG TGGGAACGCT GCTGCAATAC CGCTTCGGCA TGGCGCTCTC CGACCTGCCC GAGCAGGCCT GGGCGCAGGC CGGCTTCAAG GGCCCCGAGC AGCTCGTCGA CAGCGGTCGC GCTCAGGACA TGCGCAAGCT GCGGCGGCTG CTGAGCCGCA ACGCGACCTG GTTTCTGGGC AAGGCCGAGG AGGAGCGCGC CGCGCTGCTG GCCTACCTGG GCGCCGAGGG CTTCACCGGC GGCGCCGACC AGGCGATCGT CGATATTGGC CACAACGCCA CGCTGCAGCG CTGTTTGGGG CAGCTCTGCG GCAATAACGC GTTTCGCGGC TTCTACTTCT CGACCTTCGA CCGCGCGCGC GAGGTCGCCC GCGACGGTTA CTCGATCGAC TCGTTTCTGC TGCGCTACGA GCGCAACACC TCGAGCGAGC ATCCCTACTG CAAGAATATC GGCCTGTTCG AGTTTCTGTT TCTGCCGCCG CATCCCTCGT TCGAGCGCTT CTCGCTCGAT CGCGACGGCA CCCCGCGGCC GCATCACGTG GTCGGCAACG AGGAGCGCCG CTGCCAGGTC GTCGAGCAGG TGCACGAGGG CGTGAGCGAC TTCTGCCGCG ACGTGCTCGA GACCTGTAAC TACGACGTGC GCGCCTTCGA TGTCGCGCCC AACGATGCGC TGCGCAGCTA TTTTCACTAC GCGGCGCAGC CCGATCCTGC CGACGCGCGC ATCCTGAGCC GGGTGAGTTT TGTCGACAAG TTCGGCGGCA GCAACGCCCG CTACCTCATC GAGCCGCTGC CGAACGACCT GCACGAGCGT CGCGTCTACG ACCGCTATCT GCGCAAGAGC TGGTGGCGCA AAGGCGCCGA GGTGCTCGCC CAGGCGGCCG CGGAGCCGAG CCTCGGGACG CCGCGCAAAG GCGGTTCGCG GCGCAAACTC CAGGAGTCGC AGAAGAGCGT GTGGGAGCGA AAGTTGCGCA AGCTGCTCCG CGATCCCCAG TTGTTCTTCG CCGACGCGGT CAACAAGCGC ACGCGCAAAC GCAAACGCAA ATGA
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Protein sequence | MRILYYLEPM IELGNPLFRM GTVRNHLDRE VKALQAHPKE RIEVRVLCSE AVARESKANG LLKDATVSTV DAERLQRAFP DYQSISSAWY RGSYSPNDSM YMMGLVAEAL EGFVPDVIIC YESSAPFLSE LFPRALFLNS MLGLLSRPPY PEMSYLDPVG IGRYSSLIQF QDQLRAHTID DAARARLEHM KERYRWTLLK YSPVRAGMIR QGFDRVLLVP LQVSKYFMFN DNCRDEQPFG NQLDFLRHVA ARVDRNIGLF VTMHGAETAY MSDEVLRGLK TEFPNIMFSS GLQELRWSSQ HILPHVDGVV TVSSSVGMQT LLWDIPVFCA GMSHVNAISS GAVEDIDAVL GEDSFAPKDE IFHFLLTRYS PLLDRYHHDP VWFHDFLERG ISMREVAPLG LDFFAPIDDE ERLFLALEED LRVPAYHADL KRSKKSFSIS RTADLVSAHA SVVSADIVSF DVFDTLLTRE LAEPATVWDL VRLEAERTLP ELRWSSAQPF AQLRRDAAQQ AAEAARAEGK EEYTLAAVYE SIGEQLGLSK ADADALLALE LQVERRVHRK PRRRGWMLYQ EAKGLGKRVI AVSDTYLPKD FVASLLADAG YELDELYTSS EYERLKKTGA LFTIVRKREG RKKRILHIGD NYLSDVQMAS AKKLQAFHLP NLSEIYAESS KGPGWTRGDL AASCGASLMH GAISRKFFDE EPPEDSWLGG SPYRLGYVAG GPLVLAFTAW LVEQLADADI RRAYFLARDG YLIRKIYELI RQHNPALPEA RYLLASRRAY SFPSVKDEQA LLKTLDWRFS ECPVGTLLQY RFGMALSDLP EQAWAQAGFK GPEQLVDSGR AQDMRKLRRL LSRNATWFLG KAEEERAALL AYLGAEGFTG GADQAIVDIG HNATLQRCLG QLCGNNAFRG FYFSTFDRAR EVARDGYSID SFLLRYERNT SSEHPYCKNI GLFEFLFLPP HPSFERFSLD RDGTPRPHHV VGNEERRCQV VEQVHEGVSD FCRDVLETCN YDVRAFDVAP NDALRSYFHY AAQPDPADAR ILSRVSFVDK FGGSNARYLI EPLPNDLHER RVYDRYLRKS WWRKGAEVLA QAAAEPSLGT PRKGGSRRKL QESQKSVWER KLRKLLRDPQ LFFADAVNKR TRKRKRK
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