Gene Hoch_1566 details

Gene Information

• Locus tag: Hoch_1566
• ID: 8543948
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haliangium ochraceum DSM 14365
• Kingdom: Bacteria
• Replicon accession: NC_013440
• Strand: +
• Start bp: 2137387
• End bp: 2144118
• Gene Length: 6732 bp
• Protein Length: 2243 aa
• Translation table: 11
• GC content: 76%
• IMG OID: 646386275
• Product: HEAT domain containing protein
• Protein accession: YP_003266010
• Protein GI: 262194801
• COG category: [R] General function prediction only
• COG ID: [COG2319] FOG: WD40 repeat

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 0.832677
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGGCTGAGA AATTCGGACA CCACGTCGAA CGTCTGCGCG CCGTGGCGGT GTCGCCCTCG 
CGGCGCCTGC TGGCGATCGC GGGCGAGCGC GATCTCGGCG TCCGCGCCGG CAACAGCGTC 
GACGCGCCCA CGCATGTGCA GGTGCTCGGC CTGGCCAAGT TCGACGCCAA GCACGCCACC 
GCGATCGCGA GCGCCGTGCA CGCGCTGTGC TTCGTCTCCG ACGAGCTGTT GTTGATCGGC 
TCGGCGCGCG GCGAGATCAC GGGCGTGGAC CCGAGCGCGG TCGGCGGCGG CGCCGCGCGC 
GTGAGCATCG CGGCCACGGC TGCCGGTGAG GCGGGCGCCG CGGTGCGCGC GATCGCGTGC 
GATGCCGCGG GGACCTACGC GGCCACGGCC GGCGATGACG GCGTGCTGCG CGTGTTCCGC 
ATCGGCGACG CGGCGCTCGA GCCGGTGGCC GCGCACGCGG TGAGCACGCG GCCGCTGCGC 
GCGGTGGCCA TCGATCCTCA GGGCGCGCTG GTGGCCGCGG CCGGCGATGA CGGCGTGATC 
TACGCGCTGC CGCTCACGGC CGAGGGCGGC GAGCCGCGGC GCATGCCGTG CGGCGAGGGC 
GGCGTGGGCG CGCTGTGCTT CACGGGCGAC GCGCGCATCG CGGCCGGCTG CGGCGACGGC 
TCGATCCATC TCTGCTATCT CGAGGGCGCG GTCGACGCCG AGAACCGCTC GGGCGAGGCC 
GGTCACACGG CCATGGTGCG CGGTCTGGTG TACGGCGCGG CGCTGGTCGA TGAGGCCGGG 
CGCGCGCTGC CGCGGCGGCT GTACTCGATC GCCGAAGACG GCGCGCTCAA GCTGTGGCAG 
CTCGACACCC GGCGCCGGCC CAAGACCCTC GATCTCGGCG CGGGCGCGCT GCGCGCGATG 
GCGTGGAGAT CGGCCGAGCG GTCGGCCAAG GTCGACAAGC GCGGCGGCGC GCTTGCGGTG 
GTGAGCGACA GCCGCACGCT GATCGCGACG GATATCGACG AGCAGGCCGA GCCCAACCAG 
GCGCTGCGCC GGCTGGGCTC GGAGTTCGAG CGGCTGACTG AGGATCTCGG CGCGCGCGCC 
GACCAGGTGC GCATCGCGGC CGTCGACACG CTGTCCGGCT ACGAGGAGGA CGAGGCCCGC 
GAGCTGCTCG ACCGCGCGCT GAGCCAGGAC CGCAAGCCCG AGGTGCGCAA GCACGCGGCC 
GAGCTCATCG GCAAATCCGG GCGGCGGCTG AGCCGGCCGG CCCTGCGCAC GGCGCTCAAC 
GACGACAACA AGGGCGTGCG CCGCGCGGCT CTGAGCGCGC TGCGCGCGAT CGACAGCGAC 
ACGCCGCTGG CGCCGCTGCG CGCGGCTCTG GGGTCGCGCC ACTCGGACAT GCGCATCGCG 
GCCGTGCGCG CGCTGCCGGC GCTGCGCGCG GTGTCGCCGC TGGTGCCGGG TCTGATCGCC 
GACGCTTTGC GCGACGCGGC GTCCGAAGTT CGCAGCGCGG CGATCGACGC TCTGTACGAA 
CTCGAGGGCA AGGACTCGCT CGAGCCGGTG CGCATCGCCA TCGCGCGCGG GCCCGCGGAT 
GTGCGCCAGA TGGCGCTGCT GCGCCTGGCC CGCGCTCGCC AGACCCAGGA TCCGCTGGGC 
GCGGCGCTGC TCGAGGGCGC GCTCGACGAC GACGATGAAT CCGTGCGCGC CACCGCCTTC 
CTCATCGCGG TGGGCGCGCG CTCGGCGCTG GCCGCGCGTC TGCGCCAGGT GGACGCCAAC 
ACCACCAAGG CGCTGAGCGC GCTGGAGAAA GACGGACGAC TGTCCGACGT CGCCAGCGGC 
GCGGAGCTGA GCGAGGACGA TCTGAGCCCG CTGTTCGCGG CGCTGACCTG TCGCCACCCG 
GACACCGCGC TGCGGGCCGC GCGCACGCTC GGCCTGCTCG GCGACGCGCG GGCCACGGGC 
GCGCTGCTGC AGCTCAGCCG CGAGCCCGAC GTCGGCGTGC GCGGCTACGT GGTCGAGGCG 
CTGAGCGCGG CGGCCGCCGC CATGCCCGGC GACACCCGGC TGGTGGCGCG GCTCGAGTGG 
CTGCTCGACG ACGACGCCGA GGGCGTGCGC GGCGCCGCGT TCAACGCCTT GCAGTGGCTG 
GCGCAGCCCG AGGGCGCGCG CGGACAGCTC GACCTGGCCG CGCTGCTGCT GCGCTGTAGC 
AGCCGCGATG TGCGCCTGCG CGCGCTGCCG ATTCTGGTGC AGTTCGGCGG CAACGGCAGC 
TTCGCCAAGC GCGGCGTCGA CGCCGAGCTG GGCGAACGCG CCAGCGCGCT GCTGGGCGAC 
GCGCTCGATG ACGAAGACGA TAAAGTCCGC GGCGAGGCCT TCAGCACGCT GTGGTCGTGG 
CACGGCAAGG AGCCCGAGGT CGCGCTCGGT CGCGGCGCCG CCTGCCGCCA CGCCGACATC 
CGCCGGCGCG TGGTCGCCGA GCTGGCCCGG CTGCCCAAGA AGTCGGGCGC GCTGGAGCCC 
GGCGCGTGGG GCGACGTGGC GCTGATCGCG CTGCTCGGCG ACGCCGACGC CAGCGTGGGC 
AAGGCCGCGT TCGACGCGCT GACCGATAAA AAAGAGGGCA AGCGCCGCGT CGACGTGCAC 
CGCGCGGCGC TGGACGCGCC GCGACCGGCG GTGCGCGTGG CTGCTCTGGC TGGCGCGCGC 
AGGTCGATGG CCGGCGAGCT GCGCGAGCGC GTGGTCGAGC TGGTCGGCGA CGAGCAGCCG 
AGCGTGCATA TCGCCGCGAT CGAGTGTCTC GACCGCATCG CGCCCGACGA CGCATCGGGC 
TTCGCGCTGG CCTTTGGCAG CATCTTCTAC GAGCTGCGCG TGCGCGCCTG CGAGCTGTGC 
GGCAAGCGCC GCGACAGCCG CGCGATCGCG CCGGCCAGCG AGCTGCTGAG CATCCCGGCC 
ACGCACATCA ATCGGCCCAG CGACGCCATC CGCCAGCGCG CGGCGCGGGC GCTGGCCGAT 
GTCGGCGATC CCTCGACCAT CGCGTTCTGC GTGTCGCTGC TCGAGGACGA GGACGGCGTG 
GTGCGCGAGA TGGCGGCCCG CGGGCTGGCC ACCGCGTGCC GACCGGGCGA GGAGCAGCCC 
TTGGTCGACG CCCTGTCCCA CAACGACCTG CCGGTGCGTA GCTGGGTTGC CGAGGGTCTG 
GCCCGGCTGG GCGACGTGCG CGCCGTGCCG GTGTTGGCCG GCACCCTGCG CCACGATCAC 
CAACCCATCC GGGTGGGCGC GATCTACGGC TTCGTGGCCC TGGGCCCCGA CGGCGTGCGC 
GGCATCCTGC AGGGCCTCGA CGACCGCAAC CGCGACATCC AGGACCTGGT GTTCGCCGTC 
ATCGTCGCCC GCGACGCGGC CCTCACGCGG GCCGGGCTGC CGCCCGATCT GCTGCTGTCG 
GCGCTGTCGT CGTCACACCC CGAGATCCGC TTCGCGGCCG CGCGCGTGCT CGAGACCCGC 
ATCCGCCTGG GCGAGGGCGC CGACGCGCTG AGCGAGCTGG CCATGGAGCT GGTCGGCCCG 
CGCAAGCCCG ATCGCGCCTC GGACATGAAG GACTGGCCCG ATGAGGACGA GCGCCGCCGC 
CGCCTGCAGG TGGTGATCGA CGCGCTGGCC AGCGACCACC CGGCGCAGCG CTACGCGGCC 
ACCCAGGTGT TGTCGCTGCG CGGCCAGGCG CTGGCGTTCT GGCGCGAGGC CGAGCGCCTC 
AGCGGGCCGA GTTCGTCCAA GCGTCCGAGA ATTCCGCATA CCAACTGGGA AGACGGCGAG 
GAGTTTCAGC CGCGCAAGCG CGACTGGATC CGCAGCCTGC TGGGCAAGCG CACGGCAGCC 
GCGGGCGAGA CCGCGACCGA GCGCGTGCTC ACGGTGCTCA AGTTCGCGGG CGCCGCGGGC 
GGGCGCGCGG TGCCGCCGCA GCAGACCAGC TTCGATACCG GCGCGGCCGA GCGGCTGGTG 
TTCGGCACCT ACGCCGGTCT GGTGCGCCAG GCGCCGCCGC GCGGCGAGGC CGACGAGACC 
CACCGCGTGC GCCGCGACAG CATCGCGCGT CTGGCGGCGC TGGCCGCGTC CTCGGCCGTG 
GGCCGCGACG CCGCGCTGCC GGTGCTGCGG CGCGCGCTCA GCGATCCTCA TCACCTGGTC 
CGCAAGGCGG CCCTGAGCGC GCTGCGCGAG CTGTACCCGA GCGGCGCCCA CGAGCCGCAG 
GAGCTGGCGC TGCAGGCGTC GGCGGCCGAC GTCGGTCGCG GCGCGGTTGA TGAGCTGGTC 
GCGGCCGCCC TGGACGGCGA CGAGGCCGCG GCCGCGCTGG CCAAGCGCGC GCTCGATGCG 
CCGGTGCCCG AGGTGCGCGC CTACGCCATG ACGCAACTGC CGCGCCTGTT CGAGAACGGC 
AGCCTGGAGC CGTGGCTGCT GGCGCTGTCG AGCCGCCACG CCGACGTGCG CCTGGCGGTT 
GTCGACCGAC TGGTCGACGC CACCGACGAG CGCGTGGTCG ACGCCCTGGG ACGCGCGCTC 
GAGAGCGATC ACGAGGACCT GCGCTTCAAG GCCGCGGCCG CGCTGGCGCG TCGCGGAGAC 
GCGCGCACGG TCGACGTGCT GGCCGGGTTT TTGCGCTCGG AGAACGCGCG CCAGTGGCGG 
GCGGCGCTCC AGGTGTTGGG CGAGCTGGCG CACGCGCGTC CCGGCGAGGA CGGCGCGGCG 
GCGGCTGCTG CGGCGGCGCG CACCGTGGCC GCGCGGCTCG AGGACGATCC CGACCGCACG 
GCCGACCGCG GCGCGCTCAT CGACGCGCTG AGCAAGATCG GCAGCGCGGC CGGTGGCGAG 
GTGCTGCTCG GCCTGCTCGG CGACGACGAG GCCGGCGTGC GCAGCCGCGC GCTGCAGACG 
CTGCTCGGTA TCGCGCGCGA TCCCGAGGCG CCTGTGCGCG GCTACCCCGA CGGCACCAAG 
CGCACGCGCT ACGACGAGGC GCTGGCGCTG TCGTATCTGC GCGAGGCCGC GGCCAGCACC 
GATCCGGCGC TGCGCCTGGC CGCCTGCGCC GGGCTGCGCG ACATCGATGA TGCGGGCGCC 
GAGACGCTGC TGGCGCGGCT GATCGAGGAC CGCGAAGAGA GCGTGCGCGT GGCCGCGGGC 
GAGGCCCTGG CGTTCCGCGC GCGCTACGCC GAGGGCGCGA CCGTGGACAG CCTGGCCAGC 
GCGCTGCGCG GCGGGCGCCG CGAGCTGGTG CTGCCGGCCG CCGAGGGTCT GGCCCTGCGC 
GGCAAGCCCG AGGCCTTTCA GGCGCTGCTG CTGGTGTTCA AGGCCGGCGA GCAGGACGAC 
CGCGAGCGCG CGGTGCTGGC GCTGGGTTCG CTGGGCGACC GGCGCGCGCT CGAGGAGCTG 
GAGCCGCTGC TCGACACCAA GGCCGAGCTC GAGGACGAGG ATCGCGAGCT GGCGCCGGCC 
GTGGCCGAGG CGCTGGGGCG CATGCTGCCG CGGCTCGAGG CCGATGCCGA GGCCGGCAAG 
AGCGATGAGG CCGAGGCCGA GGCCGCCCGG GTGCGGCGCA CGGTCGAGAC GTTGGCCCGC 
GAGGCCGCGC CGCCGCTGCG CACGCGCGCG CTCACCGGTC TGCGCTGGGC GGGCGACGAG 
CGCAGCCGCG CGCTGCTCGA GCGCATCGCC GGTGACCGCA TGGAAAACCG GGCGGTGCGT 
ATCCACGCCG TCACCGAGCT GGGCCATCTC GGCCATGAGG GCTCGGCGGG CGTGCTCGGC 
GATAACCTGC ACGACGGCAA TTACCAGATC CGGTGGGTGT CGATGGTGGC GCTGCGCCGG 
GTGCTCGAGG GTCAGCAGAC GCGCGTGAGC CTGCGCGCGC TGCGCAGCCC GTACGACGAC 
GTCCGCGGCC CGGCGGCCGT GTACCTGGCC CAGGCCGGCG ACCCCGAGGT GCTGGTCGCC 
CGACTGTCCG AAATCGACAG CGAGGACGTG CGCCGGCGGC TGCGCGAGGG TCTGATCCGC 
CGCGGCGCGT GTCCCGAGCA GCCGCTGCGC GCGCTGCTCA CGGCGGCGCC CGGCGGCGAG 
GCCGAGGGCG CGCGCGCCGA CGCGGCCTGG ATCGCGGGCG CCTGCGCTGG CGAGGCGCTG 
GCCGACGCGG TCGTCGAGGC AGTCGGGCAG GCGCGCAGCG CGTGGCACAC AGCGCGCGAG 
CGCGGGGTGT CCACGGCGGC CGAGCGCGCG CCGCAAGAGC GCGCGGAGAG CGCGTGGCGA 
GCGGCGCTGT GGGCGGCCGG GCGAATCGGC GACGGCGGCG CCAGCACCGG GGCGGCGCGC 
ACGGCGCTGG CCGAAGAGGC TCCGAGCGCG GTCCGCGCCG AGGCCTTGCG CGTGCTGGCC 
ACCCGCGGCG GCGCGGGCGA CGTGGCCGCG ATCGAACCCT GCCTGAGCGA TCCGGCGCCC 
GAGGTGCGCA TGGCTGCGGC TGCTGCCGTG GCTGCGCTGG CGCCCGCGCG CGCGGGCGCG 
CTGCTGGGTT CGCTGGCGGT CGCCGACGCA GCGGCCATGG CGCCGGTGGC GGCGGCCGCG 
GTCGCCGAGG GCGGCGGCAA AGCCCTGCTG CAGTCCAGCG CTGGCCGACA GATGGCCTTG 
CCCGTCGTGC TGGGCGAAAA TCGGCTCGAA GAGCTCACGG CCATCGCCGG CGCGTCCGGC 
AAAGACCCCG CGCGCCTGGT CGCCATCGCC GCGCTGGGCC GTATGGCCAC CGAGGAAGCC 
GGCGCCGCGC TGCAGGCCAT CCTCGACAGC GACGGCCAGG ACGAGGCCGT CTACAAAGCC 
GCCTACCGCG CGCTGCGCAA GCTGCAGCGG CGCGTCGATA AGCGGCGCCA GTACCAGGAG 
GCCATGTCAT GA 

 

Protein sequence

MAEKFGHHVE RLRAVAVSPS RRLLAIAGER DLGVRAGNSV DAPTHVQVLG LAKFDAKHAT 
AIASAVHALC FVSDELLLIG SARGEITGVD PSAVGGGAAR VSIAATAAGE AGAAVRAIAC 
DAAGTYAATA GDDGVLRVFR IGDAALEPVA AHAVSTRPLR AVAIDPQGAL VAAAGDDGVI 
YALPLTAEGG EPRRMPCGEG GVGALCFTGD ARIAAGCGDG SIHLCYLEGA VDAENRSGEA 
GHTAMVRGLV YGAALVDEAG RALPRRLYSI AEDGALKLWQ LDTRRRPKTL DLGAGALRAM 
AWRSAERSAK VDKRGGALAV VSDSRTLIAT DIDEQAEPNQ ALRRLGSEFE RLTEDLGARA 
DQVRIAAVDT LSGYEEDEAR ELLDRALSQD RKPEVRKHAA ELIGKSGRRL SRPALRTALN 
DDNKGVRRAA LSALRAIDSD TPLAPLRAAL GSRHSDMRIA AVRALPALRA VSPLVPGLIA 
DALRDAASEV RSAAIDALYE LEGKDSLEPV RIAIARGPAD VRQMALLRLA RARQTQDPLG 
AALLEGALDD DDESVRATAF LIAVGARSAL AARLRQVDAN TTKALSALEK DGRLSDVASG 
AELSEDDLSP LFAALTCRHP DTALRAARTL GLLGDARATG ALLQLSREPD VGVRGYVVEA 
LSAAAAAMPG DTRLVARLEW LLDDDAEGVR GAAFNALQWL AQPEGARGQL DLAALLLRCS 
SRDVRLRALP ILVQFGGNGS FAKRGVDAEL GERASALLGD ALDDEDDKVR GEAFSTLWSW 
HGKEPEVALG RGAACRHADI RRRVVAELAR LPKKSGALEP GAWGDVALIA LLGDADASVG 
KAAFDALTDK KEGKRRVDVH RAALDAPRPA VRVAALAGAR RSMAGELRER VVELVGDEQP 
SVHIAAIECL DRIAPDDASG FALAFGSIFY ELRVRACELC GKRRDSRAIA PASELLSIPA 
THINRPSDAI RQRAARALAD VGDPSTIAFC VSLLEDEDGV VREMAARGLA TACRPGEEQP 
LVDALSHNDL PVRSWVAEGL ARLGDVRAVP VLAGTLRHDH QPIRVGAIYG FVALGPDGVR 
GILQGLDDRN RDIQDLVFAV IVARDAALTR AGLPPDLLLS ALSSSHPEIR FAAARVLETR 
IRLGEGADAL SELAMELVGP RKPDRASDMK DWPDEDERRR RLQVVIDALA SDHPAQRYAA 
TQVLSLRGQA LAFWREAERL SGPSSSKRPR IPHTNWEDGE EFQPRKRDWI RSLLGKRTAA 
AGETATERVL TVLKFAGAAG GRAVPPQQTS FDTGAAERLV FGTYAGLVRQ APPRGEADET 
HRVRRDSIAR LAALAASSAV GRDAALPVLR RALSDPHHLV RKAALSALRE LYPSGAHEPQ 
ELALQASAAD VGRGAVDELV AAALDGDEAA AALAKRALDA PVPEVRAYAM TQLPRLFENG 
SLEPWLLALS SRHADVRLAV VDRLVDATDE RVVDALGRAL ESDHEDLRFK AAAALARRGD 
ARTVDVLAGF LRSENARQWR AALQVLGELA HARPGEDGAA AAAAAARTVA ARLEDDPDRT 
ADRGALIDAL SKIGSAAGGE VLLGLLGDDE AGVRSRALQT LLGIARDPEA PVRGYPDGTK 
RTRYDEALAL SYLREAAAST DPALRLAACA GLRDIDDAGA ETLLARLIED REESVRVAAG 
EALAFRARYA EGATVDSLAS ALRGGRRELV LPAAEGLALR GKPEAFQALL LVFKAGEQDD 
RERAVLALGS LGDRRALEEL EPLLDTKAEL EDEDRELAPA VAEALGRMLP RLEADAEAGK 
SDEAEAEAAR VRRTVETLAR EAAPPLRTRA LTGLRWAGDE RSRALLERIA GDRMENRAVR 
IHAVTELGHL GHEGSAGVLG DNLHDGNYQI RWVSMVALRR VLEGQQTRVS LRALRSPYDD 
VRGPAAVYLA QAGDPEVLVA RLSEIDSEDV RRRLREGLIR RGACPEQPLR ALLTAAPGGE 
AEGARADAAW IAGACAGEAL ADAVVEAVGQ ARSAWHTARE RGVSTAAERA PQERAESAWR 
AALWAAGRIG DGGASTGAAR TALAEEAPSA VRAEALRVLA TRGGAGDVAA IEPCLSDPAP 
EVRMAAAAAV AALAPARAGA LLGSLAVADA AAMAPVAAAA VAEGGGKALL QSSAGRQMAL 
PVVLGENRLE ELTAIAGASG KDPARLVAIA ALGRMATEEA GAALQAILDS DGQDEAVYKA 
AYRALRKLQR RVDKRRQYQE AMS