| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1555 |
|---|
| Symbol | |
|---|
| ID | 8543937 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 2121236 |
|---|
| End bp | 2122936 |
|---|
| Gene Length | 1701 bp |
|---|
| Protein Length | 566 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 646386265 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003266000 |
|---|
| Protein GI | 262194791 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGTCT ACTGGAATGA GCTGCAGCCG CTGCTGGAGC GATTTTGGGG GACACCCCTG
TGTGTAGAGT TTGCCGAACC CGACCTGCTA CCCCGTATTT CGTGCGAGGT CGCGAATTCG
GCCACGGCAC GGATGACTGC GGACCCGCGA GCACTGTCCA GGGCCTCCGC GCCGTCCGCT
GCGGTGCTGT TCACGACCGA CATCGATTCC TTGGCAGCCG TGTCGCGGCA TTTGAACAGT
GAGGAGGCGC CGCCGCTCTT GGTCCTCGGC GACACGATCG CCACACTCGC AGCGAGGAGC
GACGATGTCT TCACGAAGCT CTTTGCCGCG TGTAGCGACA GGCTCGCGAC GATCACCGTG
TGCGCTCCTC GCGGGCAGAG CGGAGCGGGG GGGCTCGAGT CCTCGGTGTT TCCCGAGGAT
TGGCGGGTTC TTCACGCGCT GGCAGCGGCG CTCGTTGCGC TGGCGTGCGA CATCGGCGAG
CTGCAGATTC CCCAGAACGG GGTCCGGAAT CTGAACCTGC CGATCACGGC TGCAGCGCTC
GCCCGGTCGG TGCAGTCGAT CGATCCGGAG TTTGCGCGCA TTCTGAGTCA TACGCTCTCG
CGCATGGCGC ACTCGACCAT CGAGATCCGC AATCCACTGC TCACGGACAC ACCGTCCGAG
CTGGTCGCGA ATCTGGTCGA GCCCGGTAGC GGGCGGCTCG GGGTGAATAT CGACACGCTG
TGTCGTCTGA TCGAGAACGA CAACACCTAC GAGGAGCGCG TCGATCATCA CATCTCGATC
TTGGGGGCGC TGAAGGCTGG AGCGCTGCTC ACGGAGCAGC ACGAAGTCGT ACTTATGAGC
GAGCTTCTGT TGCCGACGAA TCTCGGACTT GCGGACGATT ATGTCCGATC GATTCGCGAG
CTGCCGGCCA TGTCCGATCT CGATGTGCTC TCGCACCTGC ACGAGAGAAG CGTGGGAACG
GCGACTGGTG CCCAGCAAGC GCTCGCCGTC GGCTTGCTGC GTCGACACGC CGAGAGCGTG
CGCCGTGTGC TGGCGCGTGC CATACAGCGC TTCGCGCACG ACGTAGTGGC CGGTACCCTT
GCGGACTCGT GTCTGCTTAT GCGTGCGGCC TCGCCCGGGC TCCCCCACGA GCGCACGGAC
GAGGGGCGCA AGCCGGTATT TCGCAGGCTT GGAGAGCGCT CCGATTGCTG GGAAATCTGG
TTCGAGGGCG GTGAGCCTGT CTATGTAAAG GACCGCAAGG GGTTGGGTTA TATCCACCTG
CTCTTGCAGT CACAGGGGAG CACCTTCTCG GCCGCCAACT TGCGGGACGC TGTCGCGGGT
CACGGCCAGA TGCCGATCGG CAATCTCGGT CCACTCGCCG ATACCCAGGC TATCCGCCTC
TACCAGCGCC GGCTCGAGGC GTTGCGCGTC GACTTCGATA TCGCCGAGGA GCACAATGAT
ATCGGCCGCA AGGAGCGCAT TCTCTACGAG ATCGACGCGA TCGAGCAGGA ACTTCGTCGC
ACCATCGGGC TCGGGGGAAG ACTGCGCCAG AACAGTGACG CGGAACGCGC ACGCAAGTCG
GTCTCCAATG CCATCCATCG CGCCCTGCAG GAGCTACGCG GGCAGCATCC GAGGTTGGCA
CGCCATCTGA GCGCCAGCCT CAAGATCGGC AACGGCGTCG CATACCTGCC GGACAGCGAC
ACCGAGTGGG AGACCGCGTA A
|
|---|
| Protein sequence | MPVYWNELQP LLERFWGTPL CVEFAEPDLL PRISCEVANS ATARMTADPR ALSRASAPSA
AVLFTTDIDS LAAVSRHLNS EEAPPLLVLG DTIATLAARS DDVFTKLFAA CSDRLATITV
CAPRGQSGAG GLESSVFPED WRVLHALAAA LVALACDIGE LQIPQNGVRN LNLPITAAAL
ARSVQSIDPE FARILSHTLS RMAHSTIEIR NPLLTDTPSE LVANLVEPGS GRLGVNIDTL
CRLIENDNTY EERVDHHISI LGALKAGALL TEQHEVVLMS ELLLPTNLGL ADDYVRSIRE
LPAMSDLDVL SHLHERSVGT ATGAQQALAV GLLRRHAESV RRVLARAIQR FAHDVVAGTL
ADSCLLMRAA SPGLPHERTD EGRKPVFRRL GERSDCWEIW FEGGEPVYVK DRKGLGYIHL
LLQSQGSTFS AANLRDAVAG HGQMPIGNLG PLADTQAIRL YQRRLEALRV DFDIAEEHND
IGRKERILYE IDAIEQELRR TIGLGGRLRQ NSDAERARKS VSNAIHRALQ ELRGQHPRLA
RHLSASLKIG NGVAYLPDSD TEWETA
|
|---|
| |