Gene Hoch_1550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1550 
Symbol 
ID8543932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2113615 
End bp2114523 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content67% 
IMG OID646386260 
Producthypothetical protein 
Protein accessionYP_003265995 
Protein GI262194786 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.578829 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCTT CTCCGTATCA GAAGAAAAAT CCCGGCGATG TTCTCAAACT CCAGGATTGG 
CTCTCGGTGC AGCGCCGGAT CAAGGAGGAA CTCCGCGCGC ATCGTCATCT AGGTGGTACC
GGCGACGGCG AGGTGGATCC GGCTCGCGTG GGCCCGGCCA TCACCAGCAG CGGATTCGCG
GCCGGCGCCG TGACCGCTGG CAAGATCGCG GCCGGCGCCG TGGGGCCGCT GGCGTTGGCT
GGGGAAGCCG TACGCGATGT CCACATGGGT GTGGACCAGC GATTGCCCGA GTCGTATCTC
GCGCTGCATC CGAGCGGCGG ACACGATCAC GATGGCGTGC ACAGCCGCTC GTTGCCCGCG
GCCGTCGTGG ACACACGGCA GCTCCGCGAA CGAACCGTCG TCGAGGCGCA TTTCGAGAGT
GTCCCCGCGG ACAACGACCT CTCTCCCGCC GAGGAGACCT ATGCGCGAGG TCGCGGATTC
ACGCCCGGGA ACGTACTGCG AGCCGTGCGC GATCTGGCCG AGCATACCGG GTTCTTGACC
CGAGCGCTGC TGACCCCTGG CGCCTACAGC GGCATCGCGG GGACGCCGAT GATCATCCGG
GGTTTCAATC TGAATAATCT CCCCGATGCC GAGGATGGCG AGCGCGCGAA CGACTTCGTG
GCGATCGAGT TGCGCGTGCC GGAGCGTGAC GCTGTGGCGC GCGCCCTGGC CGAAATCCTC
GACGATCACT CCCTGCGCGT GACCGTGCCC GACCTGGGCG CGCAAGAGGC CGCCGGACAT
CTGCTCGCGG TGCGCGGCGA CGGTAGCTCT GCGCGGCCGT ACACACCGGT GTCCAACGCG
GTGAGGTTTA CGTATCAGCC CCCGGCGCAG GCGGTGTCCT CCGCGACGCT GCGCCGAAAT
CTCCGATGA
 
Protein sequence
MTSSPYQKKN PGDVLKLQDW LSVQRRIKEE LRAHRHLGGT GDGEVDPARV GPAITSSGFA 
AGAVTAGKIA AGAVGPLALA GEAVRDVHMG VDQRLPESYL ALHPSGGHDH DGVHSRSLPA
AVVDTRQLRE RTVVEAHFES VPADNDLSPA EETYARGRGF TPGNVLRAVR DLAEHTGFLT
RALLTPGAYS GIAGTPMIIR GFNLNNLPDA EDGERANDFV AIELRVPERD AVARALAEIL
DDHSLRVTVP DLGAQEAAGH LLAVRGDGSS ARPYTPVSNA VRFTYQPPAQ AVSSATLRRN
LR