Gene Hoch_1545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1545 
Symbol 
ID8543927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2105535 
End bp2105966 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content63% 
IMG OID646386255 
ProductGPW/gp25 family protein 
Protein accessionYP_003265990 
Protein GI262194781 
COG category[R] General function prediction only 
COG ID[COG3628] Phage baseplate assembly protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGACG AGCTGTTGCG CGTCCACGAT CTCAGGTTGG TGGCTTCGGG ACGCACACTC 
GGTGCGGCGC CCGGTGCCTG GCTCGCGACT ACGGGAGTGG ACAATCTACT CCAGGCCATC
TGGATGCGGC TCAATACTCC CTTGGGCGCG TTGTCCGAAT TAGGACACCC GGACTACGGA
GCCCGCCTGT TTCGGCTCAT CGGTGAATTG GACGGTCCGG TGACCCGCGA CCGCGCTCGC
TTGTACGTCG CCAGCGCTCT GCGTCGAGAG CCGCGTATCT CAAAGATTCT GTCGATTCAC
GTGACTGGCG AGGTGGAGGG GACGTCCATG CACCTGATCG TCACCGTCGC TGTGCTCCCC
GTGGGCCACG CACAGCCGCT GTCGTTGCGT TTTCCGGTGT ATCTCGATAC CGCTCGAGAC
GCCACCCCGT GA
 
Protein sequence
MDDELLRVHD LRLVASGRTL GAAPGAWLAT TGVDNLLQAI WMRLNTPLGA LSELGHPDYG 
ARLFRLIGEL DGPVTRDRAR LYVASALRRE PRISKILSIH VTGEVEGTSM HLIVTVAVLP
VGHAQPLSLR FPVYLDTARD ATP