| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1525 |
|---|
| Symbol | |
|---|
| ID | 8543907 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 2079598 |
|---|
| End bp | 2080773 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 646386235 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003265970 |
|---|
| Protein GI | 262194761 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.568964 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCCCG CCATGCCGAC CAACGATCTC ATCGATTCAC GTGTCCGTCC GCATCGTTCG
CTCGTCGCAG CGCGCGGCCT CGGCGCTGCC CTGGCGTCGC TATGCCTTGC GTTTGCGGGC
GGCTGCGGCG ACAACGACCA ACCGTCCGCG CCCGACGCCG CCCCGGCACC TGCCGACGCA
GCTGCGCCCG ACGCAGCCGC GCCCGACGCA GCCGCGTCTG ACGCCGGCGT ACTCGGCCCC
CATCTGCTGG TGGCGAGCAG TCGCGACGAT CAGGTTCTGC GCTTCGACCA GGACAGCGGC
GCCTTCATCG ACGTCTTCAT CCCGGCCGGC TCTGGCGGAC TCGACGACCC CGACACGCTC
GTCGTGCGCG GCGACTACCT CTACGTCGCC GGCGGCACCA CGCTCGAAGA CTCGGGCATC
TACCGCTACG AGCTGGCCAG CGGCAGCTTC GTCGACGTCT TCGCCTCGGG CGGCGGCCTG
CTCCGCCCCT ACGGCTTCGC CTTTGGCCCC GACGATCGCC TCTACGTCAG CAGCTTTCGC
AGCGACCAGA TCCTGCGCTA CGACGCCACC ACCGGCGCCT TCATCGACGT CTTCGCCAGC
GGCGACGGCG AGGCCGGCGG GGTCAACGGG CCCAACGGCA TGGTCTTCGA CGCCGAGGGC
CGGCTGTACC TGAGCACCCA GGGCAGCGTG GCCGTGGACG GCGAGGTGAG TTATCCCGGC
CTGCCGAGTG AGGTGTTGCG CTTCGATATC GGCGACGGCA GCTCGGAGGT GTTCGCCGAG
CAGCCCACAC CCATGGACAG CAGCGCCGGC TACGTCAGCC TGCTCGGCCT GAGCTTCGGA
CCCGATTGCG AAGGCGGCGC ATGCGACCTC TTCGTGAGCG ACTTCGCCAA CGGGATTCGC
CGCTACGACA GCGACGGCGC GCTCATCGGC AGCATCGACA CCAGCTACAC GGGCACGCCG
AGCAGCAACC TCACCGGCAG CATCAGCTTT GGCGATGATG GCAGCTTGTT CGCGGTCGGA
TTCGCCGACA GCGGCGCCAA CGAGGGCGTG ATTCTGCGCT GGGACGGGGC CACCGGCGAG
CCCAGGCCGG CGGCCGAGCT GAGCGGCGCG CTGCTGGTCG AGGACAGCGA GCCCGAGCTG
ATCCGGCCGA TCGGCATCCT GGCCATCTCG CCCTGA
|
|---|
| Protein sequence | MLPAMPTNDL IDSRVRPHRS LVAARGLGAA LASLCLAFAG GCGDNDQPSA PDAAPAPADA
AAPDAAAPDA AASDAGVLGP HLLVASSRDD QVLRFDQDSG AFIDVFIPAG SGGLDDPDTL
VVRGDYLYVA GGTTLEDSGI YRYELASGSF VDVFASGGGL LRPYGFAFGP DDRLYVSSFR
SDQILRYDAT TGAFIDVFAS GDGEAGGVNG PNGMVFDAEG RLYLSTQGSV AVDGEVSYPG
LPSEVLRFDI GDGSSEVFAE QPTPMDSSAG YVSLLGLSFG PDCEGGACDL FVSDFANGIR
RYDSDGALIG SIDTSYTGTP SSNLTGSISF GDDGSLFAVG FADSGANEGV ILRWDGATGE
PRPAAELSGA LLVEDSEPEL IRPIGILAIS P
|
|---|
| |