| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1485 |
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| Symbol | |
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| ID | 8543867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 2016242 |
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| End bp | 2017981 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 646386196 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003265931 |
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| Protein GI | 262194722 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.522952 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAGAA GGACCTTGTT CTCGGACACC CGAGCGAAAT CGCTTGCCGC GAGCGTGCTG
GCCGCCAGCG TGCTCGCCAC CGGCGGCCTG AGCGCTTGCA AAGACTCGCC CAACGCGCCC
AAGGCGTCCG ACAAAAGCGC GGCCAACGGC GAGCCCGCCG CGGCCGCCGC CGTGCTCGCG
GTCGGCATGC CCAACGGCCC GCAGACCGAG AACCACAACC CCTTCCTCAC CACCTCGGCC
GCCGCGTCGC TCGGCTATCG CTGGATGATG TACGAGCCGC TGATGATGTG GAATCCGGTC
AAGCCGGCCG AGCCCTCCAA GCCCTGGCTG GCCGCCAGCG TCAAGTGGTC GCCCGATTTC
AAGAGCGCCA CCATCGAGGT GCGCGACAAC GCCAAATGGA GCGACGGTAA GCCGGTGAGC
GGCGAGGACG TCGCCTACAC CTTCCAGCTC ATCAAAGACC ACGAGGCGCT CAACCTGCAG
GCCATCCCCT ACGGCGACAT CGCCGCCTCG GGCAACACCG TGACCGTCAG CTTCGACAGC
TCGATGTTCG TGTACAAGGA CAAGTGGCTG GGGCAGACGC CGATCGTGCC CAAGCACATC
TGGGAGACGG TCGAAAACCC GGCCACGCAC ACCAACAAGG CTCCGGTCGG CAGCGGCCCG
TACACGCTCA AGTCGTTCAC GCCGCAGACC ACCACGCTCA CGCTGCGCAG CGACGGCGGC
TACTGGCAGG ATCTGCCCGC GGTGGAGGAG CTGCGCTACA CCTCGTATCT CGACAACAAC
GCCCAGACCA CGGCGCTGTC CGACGGCTCG TCCGAATGGT CGTTCGTCTT CATTCCCAAC
TACAAGACCG TGTTCGTCGA CAAAGACCCG GAGCACTACC ACGTGTGGGC GCCGCCGGTG
CTCGGCATCC ACGGCCTGTA CATCAACACC ACCAAGCCGC CCTTCGACGA CGTCGCGCTG
CGCAAGGCCA TGAACCTGGT CATCAACCGC GAGGACATCT TCTACCAGGC CGAGGCCGGC
TACTTCCACC CGCTGGTGAC CAACGTGAGC GGTCTGCCCT CGCCCGCCGG TGACGCGTTC
ATCGCCGAGG CGTACGAAAA CCAGGAGCAC AGCGTCGATG TCGAGGGCGC CAAGAAGCTG
CTCGCCGAGG CCGGCTACAA GCTCGAGGGC GAGACCCTCA AGGACCCCAA CGGCAAGCCG
GTGACGCTGA CGCTGACCGA TCCGGCCGGC TGGTCCGATT ACCAGACCTC GCTCGAGATC
GTCAAAGACA ACCTGTCCGA AATCGGCATC GCGGCCACGG TGGAGAAGGC CAACCACGAC
GCCTGGTTCC GCAACGTCGA GGAAGGCAAC TTCGACGCCA CCTTCCGCTG GACCAACAGC
GGATCCACGC CTTACGACAT CTACCACACG GTCATGGACG GCGCGCTGCT CAAGCCCGTG
GGCACGGCGT CGCCGGGCGG CAACTTCGGC CGCTTCGACA GCCCGGAGGC GACCGCGGCG
CTGCGCGAGT ACGCCGATGG CAACGACGAC GCCGCCCGCA GCGCGGCGCT CGCCACCTTG
CAGCGGGTGT TCGTCGAGCA GGTGCCCATG ATCCCGGTCG GCGCCGACAA CATCGGCATG
GCCTACAGCA CCAAGAACTG GGTCGGCTGG CCCGACGAGA CCAACCCGTA CACGGCCGGG
CAGCCGACGC AGCCCAACGC CCTGGACGTG GTCCTGCACC TCGAGCCCGC CGGCTCCTGA
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| Protein sequence | MQRRTLFSDT RAKSLAASVL AASVLATGGL SACKDSPNAP KASDKSAANG EPAAAAAVLA
VGMPNGPQTE NHNPFLTTSA AASLGYRWMM YEPLMMWNPV KPAEPSKPWL AASVKWSPDF
KSATIEVRDN AKWSDGKPVS GEDVAYTFQL IKDHEALNLQ AIPYGDIAAS GNTVTVSFDS
SMFVYKDKWL GQTPIVPKHI WETVENPATH TNKAPVGSGP YTLKSFTPQT TTLTLRSDGG
YWQDLPAVEE LRYTSYLDNN AQTTALSDGS SEWSFVFIPN YKTVFVDKDP EHYHVWAPPV
LGIHGLYINT TKPPFDDVAL RKAMNLVINR EDIFYQAEAG YFHPLVTNVS GLPSPAGDAF
IAEAYENQEH SVDVEGAKKL LAEAGYKLEG ETLKDPNGKP VTLTLTDPAG WSDYQTSLEI
VKDNLSEIGI AATVEKANHD AWFRNVEEGN FDATFRWTNS GSTPYDIYHT VMDGALLKPV
GTASPGGNFG RFDSPEATAA LREYADGNDD AARSAALATL QRVFVEQVPM IPVGADNIGM
AYSTKNWVGW PDETNPYTAG QPTQPNALDV VLHLEPAGS
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