| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1484 |
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| Symbol | |
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| ID | 8543866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 2015074 |
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| End bp | 2016204 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 646386195 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_003265930 |
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| Protein GI | 262194721 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.642666 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.667215 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCGA GCAATCCCGC CGAGACGCCG GGCAGCGAGG TGGTGCTCGA GGCCGAGGGC
CTCACCAAGC ACTTCCCCGT GCGCCGCAGC CTGCGCGACA TCCTGCGCAA CCGGCGCCAT
GTCGTCCACG CGGTCGACGA CGTCAGCCTG GCCCTGCGCC GCGGCCGCGT CACCGCCCTG
GTCGGCGAGT CGGGCTCGGG CAAGTCCACG GTGGCCCGGC TGCTGTCGCA GCTCTATCCG
CGCACCGGCG GCGATATCCG GCTGCACGGC ACCTCGACCA CGGTCCACGG CGGCCGCGCC
TTCCGCCGCT ACGCGCAGAA GGTCCAGATG ATCTTCCAGG ACCCCTTCGC GTCGCTCAAC
CCGGTGCACA CCATCCGCTA CCACCTGAGC CGCGCGCTCA AGCTGCACGG CAACGCTGGC
AACACGGCCG ACGAGCTCGA GCAGGCGCTG CGCGACCTGC TCACCCGGGT GTCGCTCACG
CCGCCCGAGC GCTACCTCGA CAAGTTCCCG CACGAGCTCT CGGGCGGCCA GCGCCAGCGC
GTCGCCATCG CTCGCGCTCT GGGCGCCAAT CCCCAGGCCC TGCTCGCCGA TGAGCCGGTG
TCCATGCTCG ACGTGTCCAT CCGCCTGGGC GTGCTCAACC TGCTGCGCGA CCTCAAGGAG
CGCTTCCACC TGGCCATCCT GTACATCACC CACGACATCG CCTCGGCGCG CTACTTCGCC
GACGACACCC TGGTGATGTA CGCCGGACGC ATGGTCGAAG GCGGCGACAG CGAGACCGTC
ACGCAGTCAC CGGCGCATCC CTACACCCGG CTGCTCATCG ACTCCGCGCC CGACCCCGAT
CACCTGCACG GCGACGCCGA CCACGGCGAT GAGCAAGCCG CCAGCGCTGA CCCCAGCAGC
GGCGAGCCGC CCAGCCTCAT CCACCCGCCC AGCGGCTGCC GCTTCCACCC GCGCTGCCCC
AAGGCCATGC CGCGCTGCAC GCGCGAGCTG CCGGTGCCGC TCGAGATCGG CGACCAACCC
GGCCACTGGG CCGCGTGCTG GCTGTACGAC GAGGCCACCG CCGCGCCCGA GCACGCCGGC
TCCACGCCCG CGGGCGCCGG CATGGCCGCG CCGACGGAGG CGAAGGCATG A
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| Protein sequence | MTPSNPAETP GSEVVLEAEG LTKHFPVRRS LRDILRNRRH VVHAVDDVSL ALRRGRVTAL
VGESGSGKST VARLLSQLYP RTGGDIRLHG TSTTVHGGRA FRRYAQKVQM IFQDPFASLN
PVHTIRYHLS RALKLHGNAG NTADELEQAL RDLLTRVSLT PPERYLDKFP HELSGGQRQR
VAIARALGAN PQALLADEPV SMLDVSIRLG VLNLLRDLKE RFHLAILYIT HDIASARYFA
DDTLVMYAGR MVEGGDSETV TQSPAHPYTR LLIDSAPDPD HLHGDADHGD EQAASADPSS
GEPPSLIHPP SGCRFHPRCP KAMPRCTREL PVPLEIGDQP GHWAACWLYD EATAAPEHAG
STPAGAGMAA PTEAKA
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