| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1483 |
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| Symbol | |
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| ID | 8543865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 2014097 |
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| End bp | 2015077 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 646386194 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003265929 |
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| Protein GI | 262194720 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.28032 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.876961 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTATC TGCTCCGCCG TATCGCCTTC TACCTGCTCA CCGCGTGGGC CGCGATCACG
CTCAATTTCT TCATCCCGCG CATGATCCCG GGCGATCCGG TCAAGTCGCT GATGGCTCGC
TTCCAGGGCC AGATGAGCAG CGACGCCATC CACTCGCTGT ACGTGCTCTT TGGCATCGAC
ACCGACGCCA GCCTGTGGAG CCAGTACATC GACTACTGGA AGCAGCTCGG GCGCGGCGAC
CTCGGCATGT CGTTCACGGC GTTTCCGTCC GGGGTGTCCG AAGTCATCGC CGACGCGCTG
CCGTGGACCG TGTGCCTGGT CGGCGCCACC ACCCTGCTCA GCTTCTTCAT CGGCACCGGC
TTGGGCGTAC TCGCCGGCTG GCGGCGCGGA TCTTGGACGG ACGTCCTGCT TCCCACCACG
ACCTTTCTGT CGTCGGTGCC GTACTTCTGG CTGGGGCTCC TGGCCATCTT CGTGCTCACC
GGCCCCGACA GCGTATTTCC CTCCTCGGGC GGCTACGCGC CCGGCCTGGT GCCCGCCTGG
GACCAGTACT TCATCCCCAG CGCGCTGCGC CACAGCCTGC TGCCGGCGTT CACCATCATC
CTGTCCTCGG CCAGCGGCTG GCTGCTGAGC ATGCGCAACA TGATGGTCAC GGTCGCCGCC
GAGGACTACA TCACCGTGGC CCACGCCAAG GGCCTCTCCG ACCGCCGCGT GGCCCTGAGC
TACGCCGCCC GCAACGCGCT CTTGCCCAAC GTCTCCGGCT TCGCGCTGTC GCTCGGCTTC
ATCCTCGGCG GCACCCTGCT GGTCGAGTTG GTGTTCTCGT ATCCGGGTCT CGGCTTCCTG
CTGTTCCGCG CCGTCATGGC CAAGGACTAT CCGCTGCTGC AGGGAATCTT CCTGATCATC
ACCATCGCGG TGCTGGTGGC GAACCTGCTC GCCGACGTCG CCTACCTGGC GCTCGACCCG
CGCACCCGCA AGGACGGCTG A
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| Protein sequence | MKYLLRRIAF YLLTAWAAIT LNFFIPRMIP GDPVKSLMAR FQGQMSSDAI HSLYVLFGID
TDASLWSQYI DYWKQLGRGD LGMSFTAFPS GVSEVIADAL PWTVCLVGAT TLLSFFIGTG
LGVLAGWRRG SWTDVLLPTT TFLSSVPYFW LGLLAIFVLT GPDSVFPSSG GYAPGLVPAW
DQYFIPSALR HSLLPAFTII LSSASGWLLS MRNMMVTVAA EDYITVAHAK GLSDRRVALS
YAARNALLPN VSGFALSLGF ILGGTLLVEL VFSYPGLGFL LFRAVMAKDY PLLQGIFLII
TIAVLVANLL ADVAYLALDP RTRKDG
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